DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10950 and Ipo13

DIOPT Version :9

Sequence 1:NP_611200.2 Gene:CG10950 / 36942 FlyBaseID:FBgn0034205 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_446230.2 Gene:Ipo13 / 116458 RGDID:620071 Length:963 Species:Rattus norvegicus


Alignment Length:616 Identity:139/616 - (22%)
Similarity:255/616 - (41%) Gaps:114/616 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EFTKELVIDAVNML----SSGNISLANEYLAAFQKSNDTWIIAEEILSYRPPHDMHILTFAAMSL 64
            :||.|.|..|::.|    :..|.:||.::|...|.|...|..:.::|  :|.....|..|.|.:|
  Rat    20 DFTVENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLL--QPDKVPEIQYFGASAL 82

  Fly    65 AKKIKTSFYSLQKFQLMSLKNSLIDHL-KYAAMMRDSNSLIVQLAVGIS--ALGLMFSQWDYELQ 126
            ..||...:..:...|..|||..|...: ::|:   .|..::.:|.|.::  ||.:|...|...:.
  Rat    83 HIKISRYWSDIPTDQYESLKAQLFTQITRFAS---GSKIVLTRLCVALASLALSMMPDAWPCAVA 144

  Fly   127 DFVRKLSENPQYV------MALLEVLKVIPEETRPSNLPVEAKKLNSVIDTLEQQSPYILDVLEG 185
            |.||........|      :||||:|.|:|||.:.|.||...|.|  |..:|..:...:..:||.
  Rat   145 DMVRLFQAEDSPVDSQGRCLALLELLTVLPEEFQTSRLPQYRKGL--VRASLAVECGAVFPLLEQ 207

  Fly   186 LLQRPDLPDDALPKCLAVCASWTKFSMLSPDQVLQRKLFIMAEFILATPLVNGHLEAAELF---- 246
            |||:|..|.....|.|...:||.:..:...|    .:..|.|.|        ..|:.:|||    
  Rat   208 LLQQPSSPSCVRQKVLKCFSSWVQLEVPLQD----CEALIQAAF--------AALQDSELFDSSV 260

  Fly   247 ---VALLEQSLIRKELNSC--LANSVICLKPAFKRSM--GERSLLQNYCNIFVNLFQTHFRLTQT 304
               |..:.|...::.:|:.  |...|:.|:...::::  |:.......|.|.|.|.:.|.|....
  Rat   261 EAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVQNGDMETSHGICRIAVALGENHSRALLD 325

  Fly   305 NPERLNERLVTIELLLL---VAEESPLEVIEASLGM--WSSISEEVYLHDDPEMYSVYQ----PY 360
            ..|.....|..:.:::.   :....|:....:||.:  |.::.::: |..:.|..:|||    |.
  Rat   326 QVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQDDI-LSFEAEKQAVYQQVYRPV 389

  Fly   361 FVRLLDLLLPRAALPANYEFMMPPG---SADMQRFR--------------ELIGEVLLDMAHMID 408
            :.:|:|:||.:|..|::.|:    |   |.:.::||              |::|..||       
  Rat   390 YFQLVDVLLHKAQFPSDEEY----GFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELL------- 443

  Fly   409 DDTVEKLCSIVVDEQSP--WMEVEASVFFLRHLIGNFKEHQTDIISCILKTFFQKDCQQPFIRLQ 471
            .:..:||..::...:.|  |...||.::..:.:......:.:|::..:               :.
  Rat   444 SNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAETIDVNYSDVVPGL---------------IG 493

  Fly   472 VLELISIPEIVSVETIWDCL--VNELRRADPMLSAIDCRLNLLMPHWNYLVTLAIMVDEFCLKES 534
            ::..|||..:...:|:...:  ::|.....|::      :|.::|    ||..|:...|..:...
  Rat   494 LIPRISISNVQLADTVMFTIGALSEWLADHPVM------INSVLP----LVLHALGNPELSVSSV 548

  Fly   535 ERCELLCSICTLIRELP--AACVQEAKTSIL 563
            ...:.:|..|..  :||  ||.:......:|
  Rat   549 STLKKICRECKY--DLPPYAANIVAVSQDVL 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10950NP_611200.2 IBN_N 25..91 CDD:197981 18/65 (28%)
Xpo1 103..>207 CDD:285575 35/111 (32%)
Ipo13NP_446230.2 HEAT 1 24..54 8/29 (28%)
IBN_N 45..109 CDD:197981 18/65 (28%)
HEAT 2 56..88 9/33 (27%)
HEAT 3 95..135 11/42 (26%)
Xpo1 117..263 CDD:400614 45/159 (28%)
HEAT 4 142..179 13/36 (36%)
HEAT 5 194..231 12/36 (33%)
HEAT 6 236..268 9/43 (21%)
HEAT 7 276..325 11/48 (23%)
HEAT 8 330..372 5/42 (12%)
HEAT 9 375..438 17/66 (26%)
Importin_rep 402..441 CDD:408544 8/42 (19%)
HEAT 10 440..476 8/42 (19%)
HEAT 11 487..522 5/49 (10%)
HEAT 12 524..558 8/43 (19%)
HEAT 13 562..600 5/16 (31%)
Importin_rep_2 584..627 CDD:408557
HEAT 14 603..648
Importin_rep_2 631..669 CDD:408557
HEAT 15 676..716
HEAT 16 720..754
HEAT 17 761..803
HEAT 18 815..845
Importin_rep_3 826..900 CDD:408577
HEAT 19 860..893
HEAT 20 897..931
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004114
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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