DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10950 and ipo13

DIOPT Version :9

Sequence 1:NP_611200.2 Gene:CG10950 / 36942 FlyBaseID:FBgn0034205 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_002931629.1 Gene:ipo13 / 100493086 XenbaseID:XB-GENE-491680 Length:954 Species:Xenopus tropicalis


Alignment Length:619 Identity:131/619 - (21%)
Similarity:248/619 - (40%) Gaps:122/619 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NAEFTKELVIDAVNML----SSGNISLANEYLAAFQKSNDTWIIAEEILS-YRPPHDMHILTFAA 61
            |.|||.:.|..|::.|    :..|.::|.::|...|.|...|..:.::|: .:.|   .|..|.|
 Frog     9 NLEFTMDNVEKALHQLYYDPNIENKNMAQKWLMQAQISPQAWQFSWQLLNGGKVP---EIQYFGA 70

  Fly    62 MSLAKKIKTSFYSLQKFQLMSLKNSLIDHLKYAAMMRDSNSLIVQLAVGIS--ALGLMFSQWDYE 124
            .:|..||...:..:...|..|||:.|...:...|  ..|..::.:|.|.::  ||.:|...|.:.
 Frog    71 SALHIKISRYWGDIPAEQYESLKSQLFAQISVFA--SGSKIVLTRLCVALASLALNMMPDTWPHA 133

  Fly   125 LQDFVRKL------SENPQYVMALLEVLKVIPEETRPSNLPVEAKKLNSVIDTLEQQSPYILDVL 183
            :.|.||..      ::.....:||||:|.|:|||.:.|.||...|.:  |..:|.|:...:..:|
 Frog   134 VSDMVRVFQKEDGQTDGGSRCLALLELLTVLPEEFQTSRLPPYRKGI--VRSSLAQECTCVFPLL 196

  Fly   184 EGLLQRPDLPDDALPKCLAVCASWTKFSMLSPDQVLQRKLFIMAEFILATP-LVNGHLEA----- 242
            ..||::.|.|.....|.|...:||.:..:...:   ..:|.:.|...|..| |.:..:||     
 Frog   197 RQLLEQSDTPGFVKQKVLKCFSSWAQLEIPLTE---CEELTLAAFSALRDPELFDSAVEALVNTI 258

  Fly   243 ----AELFV----ALLEQSL-IRKELNSCLANSVICLKPAFKRSMGERSLLQNYCNIFVNLFQTH 298
                |:.:|    .|:.|:| ::.:|:..:.|             |:.......|.|.|.|.:.|
 Frog   259 SQPDAQRYVNTLLKLIPQALSLQDQLHQAVQN-------------GDLETSHGICRIVVALGENH 310

  Fly   299 FRLTQTNPERLNERLVTIELLLL---VAEESPLEVIEASLGM--WSSISEEVYLHDDPEM---YS 355
            .|......:.....|..:.:::.   :....|:....:||.:  |.|:.::::..:..:.   ..
 Frog   311 SRAFLDQVDHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYSLQDDIFSFEAEKQAVYLQ 375

  Fly   356 VYQPYFVRLLDLLLPRAALPANYEFMMPPGSADMQRFR--------------ELIGEVLLDMAHM 406
            ||:|.:.:|:|:||.:|..||:.|: ....|.:.::||              |::|..||     
 Frog   376 VYRPVYFQLVDVLLQKAQFPADEEY-ASWSSDEKEQFRIYRVDISDTLMYVYEMLGAELL----- 434

  Fly   407 IDDDTVEKLCSIVV--DEQSPWMEVEASVFFLRHLIGNFKEHQTDIISCILKTFFQKDCQQPFIR 469
              .:..:||..::.  |:.:.|...||.::..:.:......:.:|::..::..            
 Frog   435 --SNLYDKLGRLLTSSDQSTSWQHTEALLYGFQSIAETIDVNYSDVVPGLIGL------------ 485

  Fly   470 LQVLELISIPEIVSVETIWDCLVNELRRADPMLSAIDCRLNLLMPHWNYLVTLAIMVDE---FCL 531
                    ||.|         .:|.::.||.::..|......|..|       .:|:.:   ..|
 Frog   486 --------IPRI---------NINNVQLADTVMFTIGALAEWLADH-------PVMISKVLPLVL 526

  Fly   532 KESERCELLCSICTLIRELPAACVQEAKTSILNI 565
            ......||..|..:.::::...|..:......||
 Frog   527 HALGNPELSVSSVSTLKKICRECKYDLPPYAANI 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10950NP_611200.2 IBN_N 25..91 CDD:197981 18/66 (27%)
Xpo1 103..>207 CDD:285575 32/111 (29%)
ipo13XP_002931629.1 CRM1 23..>621 CDD:227432 125/605 (21%)
IBN_N 36..97 CDD:197981 17/63 (27%)
Xpo1 107..254 CDD:369848 41/151 (27%)
Importin_rep 393..432 CDD:376194 8/39 (21%)
Importin_rep_2 575..613 CDD:376205
Importin_rep_2 622..663 CDD:376205
Importin_rep_3 817..891 CDD:376225
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004114
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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