DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10950 and tnpo3

DIOPT Version :9

Sequence 1:NP_611200.2 Gene:CG10950 / 36942 FlyBaseID:FBgn0034205 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_031754955.1 Gene:tnpo3 / 100490799 XenbaseID:XB-GENE-998615 Length:933 Species:Xenopus tropicalis


Alignment Length:586 Identity:149/586 - (25%)
Similarity:263/586 - (44%) Gaps:71/586 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ANEYLAAFQKSNDTWIIAEEILSYRPPHDMHILTFAAMSLAKKIKTSFYSLQKFQLMSLKNSLID 89
            |:.:|...|:|...|.||:::|...  .|:....|||.::..||:||||.|.....:||::||:.
 Frog    29 ASLWLGELQRSVYAWEIADQLLQIH--QDVESCYFAAQTMKVKIQTSFYELPSDSHVSLRDSLLS 91

  Fly    90 HLKYAAMMRDSNSLIV-QLAVGISALGLMFSQWDYELQDFVRKLSENPQYVMALLEVLKVIPEET 153
            |::   .::|.:.:|: |||:.|:.|.|:.:.|...:|..|...|.:...:..|||:|.|:|||.
 Frog    92 HIQ---NLKDMSPVILTQLALAIADLALLMASWKGCVQTLVESYSNDVTSLPFLLEILTVLPEEV 153

  Fly   154 RPSNLPVEAKKLNSVIDTLEQQSPYILDVLEGLLQRPDLPDDALPKCLAVCASWTKFSMLSPDQV 218
            ...:|.:.|.:...:|:.|...|..::.:|....::....:..|.|......||....:|..:.:
 Frog   154 HSRSLRIGANRRAEIIEDLAYYSSTVVSLLLSCAEKAGDNEKMLIKIFKCLGSWFNLGVLDSNFM 218

  Fly   219 LQRKLFIMAEFIL---ATPLVNGHLEAAELFVALLEQSLIRKELNSCLA----NSVICLKPAFKR 276
            ...:|.::...:|   .|| .|.| |||...|.....::...|.|..||    ..|:.|:.|:..
 Frog   219 ANNRLLLLLFQVLQQDRTP-TNLH-EAASDCVCSALYAIENVESNLPLATQLFQGVLTLETAYHM 281

  Fly   277 SMGERSL--LQNYCNIFVNLFQTHFRLTQTNPERLNERLVTIELLLLVAEESPLEVIEASLGMWS 339
            ::....:  :.|||.||..|.:|......|.|.|....|.|:||||:.|.....||:|.|...|.
 Frog   282 AVAREDIDKVLNYCRIFTELCETFLEKIVTTPCRDLGDLRTLELLLICAGHPQYEVVEISFNFWY 346

  Fly   340 SISEEVYLHDDPEMYSVYQPYFVRLLDLLLPRAALPANYEFMMPPGSADMQRFRELIGEVLLDMA 404
            .:.|.:|...|..::.:::|:..|||..|.....|..::| .:|..:.|...||..:.:::.|:.
 Frog   347 RLGEHLYKMTDAVIHGIFKPFIQRLLHALARHCQLEPDHE-GVPEETDDFGEFRLRVSDLVKDLI 410

  Fly   405 HMIDD-DTVEKLCSIVVDEQSPWMEVEASVFFLRHLIGNFKEHQTDIISCILKTFFQKDCQQPFI 468
            :::.. :...:|.|.:.|...||...||.:|               |::.|.|:.   |.:....
 Frog   411 YLVGSMECFSQLYSTLKDGNPPWEVTEAVLF---------------IMAAIAKSI---DPENNPT 457

  Fly   469 RLQVLE-LISIPEIVSVETIWDC--LVNELRRA--------DPMLS-----------------AI 505
            .::||| ::.:||.|.:...:..  ||.|:...        ||:|:                 ||
 Frog   458 LVEVLEGVVRLPESVHIAVRYTSIELVGEMSEVVDRNPQFLDPVLAYLMKGLFQPSLASPSAKAI 522

  Fly   506 D-----CRLNLLMPHWNYLVTLAIMVDEFCLKESERCELLCSICTLIRELPAACVQEAKTSILNI 565
            .     ||.::.: |:|.|:.:|..:|.|.|.......||.....::..||...:.|..:.:.::
 Frog   523 QNICSVCRDHMAL-HFNGLLEIARSLDSFTLHPDAAVGLLKGTALVLARLPLEKISECLSELCSV 586

  Fly   566 R 566
            :
 Frog   587 Q 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10950NP_611200.2 IBN_N 25..91 CDD:197981 23/65 (35%)
Xpo1 103..>207 CDD:285575 27/104 (26%)
tnpo3XP_031754955.1 IBN_N 29..95 CDD:197981 24/70 (34%)
Xpo1 120..221 CDD:400614 23/100 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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