DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30457 and CG10953

DIOPT Version :10

Sequence 1:NP_611198.1 Gene:CG30457 / 36940 FlyBaseID:FBgn0050457 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_611199.1 Gene:CG10953 / 36941 FlyBaseID:FBgn0034204 Length:278 Species:Drosophila melanogaster


Alignment Length:280 Identity:140/280 - (50%)
Similarity:159/280 - (56%) Gaps:93/280 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFLVVAVALLAVAHADVSHLSGYNY-----------------------------APVSIPQPAP 36
            |||||||.|:||.|:.||||| ||:|                             |||.||.|||
  Fly     1 MKFLVVAFAVLACAYGDVSHL-GYDYSPPAPAPVYQPAPAPVYQPAPAPVYQPAPAPVVIPAPAP 64

  Fly    37 LPVA----APAPIKV-APAPVNTYIPPA----------PAPAPVQIEVPA--PAPAPVAIPAPAP 84
            .||.    ||||:.: |||||.||:|||          |||||::|..|.  |||||::||||||
  Fly    65 APVVIPAPAPAPVVIPAPAPVKTYVPPAPISIPAPVYQPAPAPIRIPAPVYQPAPAPISIPAPAP 129

  Fly    85 IKV-APAPVNTYIP----------------------------PAPVQVEIPAPAPAPVAIPAPAP 120
            |:: ||||||||||                            |||..|.|||||||||.||||||
  Fly   130 IEIPAPAPVNTYIPPAPAPAPVYQPAPAPIPVSIPAPAPVYQPAPAPVVIPAPAPAPVVIPAPAP 194

  Fly   121 IKV---APAPVNTYIPPAPVSIPAPAPL----PVKVAPAPAPVPVLAPQP--------VLEEIEP 170
            ..|   |||||.:|:||||:|||||||:    |:.: ||||||...||.|        |||||||
  Fly   195 APVVIPAPAPVKSYVPPAPISIPAPAPVYQPAPISI-PAPAPVYQPAPAPVYQPTNTQVLEEIEP 258

  Fly   171 VSADGYRYKTV-RRVIRRRY 189
            .|.|||||||| |||.|.|:
  Fly   259 ASNDGYRYKTVRRRVYRHRF 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30457NP_611198.1 GYR 173..188 CDD:128953 12/15 (80%)
CG10953NP_611199.1 PRK12323 <39..263 CDD:481241 108/224 (48%)
GYR 261..277 CDD:426962 12/15 (80%)

Return to query results.
Submit another query.