DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbp2 and Qrich2

DIOPT Version :9

Sequence 1:NP_001286521.1 Gene:Gbp2 / 36937 FlyBaseID:FBgn0034200 Length:456 Species:Drosophila melanogaster
Sequence 2:XP_011247256.1 Gene:Qrich2 / 217341 MGIID:2684912 Length:2337 Species:Mus musculus


Alignment Length:481 Identity:117/481 - (24%)
Similarity:154/481 - (32%) Gaps:161/481 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 PGSIGPPPFVFGRFPP----PPSYYPDNQPSGGRQPYYPNVGAVQ---GQPGSQFHQHG----GG 111
            ||.:.|     |...|    |.|..|.....|..||.....||||   .|||:.  :.|    |.
Mouse   881 PGMVHP-----GAAQPGMVQPGSVQPGMVQLGAVQPGVLQAGAVQFGMVQPGAV--EPGVLRAGA 938

  Fly   112 FHRGQ-QEYPYPVGDFNRG--HPGLQQPG----GDFNRG-------QPGFQQPGNEFNRP-QPSG 161
            ...|. |.....:|.|..|  .||:.|.|    |...:|       |.|..|||.....| ||..
Mouse   939 VQLGMVQPGAVQLGVFRAGAVQPGVLQAGAVQPGMVQQGPVQPGVLQAGAVQPGMVQQGPVQPGV 1003

  Fly   162 RAPGHQQSGSHEELPTYPRGLE------------PQQPGG-DPNTLQP---RPGQNPGGFEQPNE 210
            ...|..|.|..::.|..|..|:            |.|||. ....:||   :||..|.|:.||..
Mouse  1004 LQAGAVQPGMVQQGPVQPGVLQAGAVQPGMVQQGPVQPGVLQSGAVQPGMVQPGILPSGWGQPVA 1068

  Fly   211 NAGGFQQSGQNNGGFRQPSQNSGGFQQPGQSTG-------------------------------- 243
            .:.|..|.|....|..||..:..||.|||.:.|                                
Mouse  1069 YSLGLGQPGIGQYGLVQPRVDRYGFVQPGVARGLLQPSDSQRALMQPGVGQVEWIQPGMSRRDLV 1133

  Fly   244 ---------------------------GFQQPGQSSGGFQQPGQSTGGFQQPGQSTGGFQQPGQS 281
                                       |..|||.:..|...||.:..|...||::..|...||::
Mouse  1134 QPGADESGLAQGGMAQQGLVQSGMARQGLAQPGMARQGVAHPGMARQGVAHPGKARQGVAHPGKA 1198

  Fly   282 TGGFRQPD--------QSSGGFQQPDQNSGEFQQPGLNQGRKPGTSNNSIQPRP---GSADEDFS 335
            ..|..|||        :...|..||..:...|.|||::|       ...:|||.   |..|....
Mouse  1199 RQGVAQPDLAQPGAPSEDKFGLAQPIVDQSAFMQPGMDQ-------RGLVQPRMYQYGFVDPSDL 1256

  Fly   336 DFNFQSPKTLQPRPGQDYETAGSGGAQTIQPI--------PGHPQSSVIQPI------------- 379
            ..||..|:.:.||              .:||:        .|..||.::|||             
Mouse  1257 QRNFLQPRGVLPR--------------LVQPVVDQGGPLQAGLAQSRMVQPITDQRGPVQPETLQ 1307

  Fly   380 PGRAQSSDNVDQNINDLFNTHDFLSP 405
            |.:.|.|.:....:..|...:..:.|
Mouse  1308 PRQVQPSTSRRGLVQSLLTPYGLMQP 1333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbp2NP_001286521.1 dnaA 26..>204 CDD:237605 54/187 (29%)
PTZ00395 <124..>428 CDD:185594 95/403 (24%)
Qrich2XP_011247256.1 SMC_prok_A <95..237 CDD:274009
Glutenin_hmw 592..1191 CDD:367362 79/316 (25%)
PHA03378 <1215..1484 CDD:223065 31/140 (22%)
SbcC <1597..>1992 CDD:223496
DUF4795 1843..2022 CDD:374325
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R15764
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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