DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda9 and serp

DIOPT Version :9

Sequence 1:NP_001286519.1 Gene:Cda9 / 36934 FlyBaseID:FBgn0034197 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001262062.1 Gene:serp / 40150 FlyBaseID:FBgn0260653 Length:541 Species:Drosophila melanogaster


Alignment Length:382 Identity:127/382 - (33%)
Similarity:197/382 - (51%) Gaps:38/382 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 AEPCKPSKCKLPDCRCSD--AALPTSKFQGKENQIPQFVTITFDDAVNAVNFAQYELLFDGLINP 101
            |.||.|:.|.||||.||:  .::| .....|:  :|..:|||||||:|..|...|:.:|....||
  Fly   168 APPCDPAVCVLPDCFCSEDGTSIP-GDLPAKD--VPMMITITFDDAINNNNIELYKEIFKDRKNP 229

  Fly   102 DGCGAAGTFFLSHEYTDYVRVNALYRAGHEIALHSVTHGDGTDYWRSADVPTIEREFGAQLKMLE 166
            :||....|:|:||:||:|..|....|.|||||:||:||.|...:|.:|.|....:|......:.|
  Fly   230 NGCSIKATYFVSHKYTNYSAVQETARKGHEIAVHSITHNDEERFWSNATVDDWAKEMAGMRIITE 294

  Fly   167 TFAKVNPKKIQGMRLPFLQISGNNTFEAARRLGLTYDSSWPTQKFKDPAMWPYTLDYKSKQDC-- 229
            .||.:....:.|:|.|:|::.|||.|.........|||: .|....:|.:||||:.::....|  
  Fly   295 KFANITDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDST-ITAPLSNPPLWPYTMYFRMPHRCHG 358

  Fly   230 QIGPCPEASIPGFW---VNPMVTWTD--TEGY--SCSMIDACVYPPEDDM---DELFDWMMENFN 284
            .:..||..| ...|   :|.:....|  .:.|  .|:|:|:|     .::   |:.::::..||:
  Fly   359 NLQSCPTRS-HAVWEMVMNELDRREDPVNDEYLPGCAMVDSC-----SNILTGDQFYNFLNHNFD 417

  Fly   285 RHYLGNRAPFGMYLHAAWFSRGRNYFGAFKKFINH-LNTYSDVYFTGISRMLEYVRKPTLGSPFK 348
            |||..||||.|:|.||||......:..||..:|:. |..::||||..:::::::::.|...|..|
  Fly   418 RHYDQNRAPLGLYFHAAWLKNNPEFLDAFLYWIDEILANHNDVYFVTMTQVIQWMQNPRTISEVK 482

  Fly   349 DCPDLPEAECRAVQ----CHV-------QKMSTGEERYMTVCDKCPSVYPWLDNPLG 394
            :..  |..|...|:    |.|       .|...||...:..|.:||:.|||:.:|.|
  Fly   483 NFE--PWREKCVVEGKPACWVPNTCKLTSKEVPGETINLQTCVRCPNNYPWVSDPTG 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda9NP_001286519.1 CE4_CDA_like_2 72..341 CDD:200597 95/281 (34%)
serpNP_001262062.1 CBM_14 48..105 CDD:279884
LDLa 125..159 CDD:238060
CE4_CDA_like_1 200..475 CDD:200596 95/281 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1060206at2759
OrthoFinder 1 1.000 - - FOG0003270
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.020

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