DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amy-d and Slc3a2

DIOPT Version :10

Sequence 1:NP_523768.1 Gene:Amy-d / 36932 FlyBaseID:FBgn0000078 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_062156.2 Gene:Slc3a2 / 50567 RGDID:3073 Length:566 Species:Rattus norvegicus


Alignment Length:465 Identity:82/465 - (17%)
Similarity:150/465 - (32%) Gaps:170/465 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 ECENFLGP--NGYAGVQ---------------VSPVNENAVKDSRPWWERYQPISYKLETRSGNE 92
            :.:.|:||  .|.||::               :.|:::|. ||     |..:....:::...|::
  Rat   161 DLQAFVGPEARGIAGLKNHLEYLSTLKVKGLVLGPIHKNQ-KD-----EVNETDLKQIDPDLGSQ 219

  Fly    93 EQFASMVKRCNAVGVRTYVDVVFNHMAADGGTYGTGGSTASPSSKSYPGVPYSSLDFNPTCAISN 157
            |.|..:::                                |...||.    :..||..|     |
  Rat   220 EDFKDLLQ--------------------------------SAKKKSI----HIILDLTP-----N 243

  Fly   158 YNDANE---VRNCELVGLRDLNQGNSYVQDKVVEFLDHLIDLGVAGFRVDAAKHMWPAD--LAVI 217
            |...|.   ....::|..:.....:|::||            ||.||:|.....:..|.  ||..
  Rat   244 YKGQNAWFLPPQADIVATKMKEALSSWLQD------------GVDGFQVRDVGKLANASLYLAEW 296

  Fly   218 YGRLKNLNTDHGFASGSKAYIVQEVID---------MGGEAISKSEYTGLGAITEFRHSDSIGKV 273
            ....||.:.|....:|:.:..:|::::         :....:|:..:||       .|::.:   
  Rat   297 QNITKNFSEDRLLIAGTASSDLQQIVNILESTSDLLLTSSYLSQPVFTG-------EHAELL--- 351

  Fly   274 FRGKDQLQYLTNWGTAW-GFAASDRSLVFVDNHDNQRGHGAGGADVLTYKVPKQYKMASAFMLAH 337
                 .::||...|:.| .::.|.                   |.:||..:|.|:......:|..
  Rat   352 -----VIKYLNATGSRWCSWSVSQ-------------------AGLLTSFIPAQFLRLYQLLLFT 392

  Fly   338 PFGTPRVMSSFSFTD-------TDQGPP---------TTDGHNIASPI-----FNSDNSCSGGWV 381
            ..|||    .||:.|       ...|.|         .:.....:||:     ....|...|..:
  Rat   393 LPGTP----VFSYGDELGLQAVALPGQPMEAPFMLWNESSNSQTSSPVSLNMTVKGQNEDPGSLL 453

  Fly   382 CEHR--------WRQIY--NMVAFRNAVGLDEIQNWWDSGSNQISFSRGSRGFVAFNNDNYDLNS 436
            .:.|        .|.:.  :..|..::.||......||         :..|..|..|..:..|::
  Rat   454 TQFRRLSDLRGKERSLLHGDFDALSSSSGLFSYVRHWD---------QNERYLVVLNFQDVGLSA 509

  Fly   437 SL-QTGLPAG 445
            .: .:.||||
  Rat   510 RVGASNLPAG 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-dNP_523768.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 70/416 (17%)
Aamy_C 405..493 CDD:214749 10/42 (24%)
Slc3a2NP_062156.2 SLC3A2_N 81..157 CDD:464983
AmyAc_family 139..469 CDD:476817 69/404 (17%)
Blue background indicates that the domain is not in the aligned region.

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