DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amy-d and AMY1B

DIOPT Version :9

Sequence 1:NP_523768.1 Gene:Amy-d / 36932 FlyBaseID:FBgn0000078 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001008219.1 Gene:AMY1B / 277 HGNCID:475 Length:511 Species:Homo sapiens


Alignment Length:500 Identity:270/500 - (54%)
Similarity:337/500 - (67%) Gaps:26/500 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AQFDTNYASGRSGMVHLFEWKWDDIAAECENFLGPNGYAGVQVSPVNENAV--KDSRPWWERYQP 80
            ||:.:|...||:.:||||||:|.|||.|||.:|.|.|:.||||||.|||..  ...|||||||||
Human    15 AQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIHNPFRPWWERYQP 79

  Fly    81 ISYKLETRSGNEEQFASMVKRCNAVGVRTYVDVVFNHM---AADGGTYGTGGSTASPSSKSYPGV 142
            :||||.||||||::|.:||.|||.||||.|||.|.|||   |...||..|.||..:|.|:.:|.|
Human    80 VSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAV 144

  Fly   143 PYSSLDFNP-TCA-----ISNYNDANEVRNCELVGLRDLNQGNSYVQDKVVEFLDHLIDLGVAGF 201
            |||..|||. .|.     |.|||||.:||:|.|.||.||..|..||:.|:.|:::||||:|||||
Human   145 PYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGLLDLALGKDYVRSKIAEYMNHLIDIGVAGF 209

  Fly   202 RVDAAKHMWPADLAVIYGRLKNLNTDHGFASGSKAYIVQEVIDMGGEAISKSEYTGLGAITEFRH 266
            |:||:|||||.|:..|..:|.|||: :.|..|||.:|.|||||:|||.|..|:|.|.|.:|||::
Human   210 RIDASKHMWPGDIKAILDKLHNLNS-NWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKY 273

  Fly   267 SDSIGKVFR--GKDQLQYLTNWGTAWGFAASDRSLVFVDNHDNQRGHGAGGADVLTYKVPKQYKM 329
            ...:|.|.|  ..:::.||.|||..|||..|||:||||||||||||||||||.:||:...:.|||
Human   274 GAKLGTVIRKWNGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKM 338

  Fly   330 ASAFMLAHPFGTPRVMSSFSF-------TDTDQ--GPPTTDGHNIASPI-FNSDNSCSGGWVCEH 384
            |..||||||:|..|||||:.:       .|.:.  |||..:|  :...: .|.|.:|...|||||
Human   339 AVGFMLAHPYGFTRVMSSYRWPRYFENGKDVNDWVGPPNDNG--VTKEVTINPDTTCGNDWVCEH 401

  Fly   385 RWRQIYNMVAFRNAVGLDEIQNWWDSGSNQISFSRGSRGFVAFNNDNYDLNSSLQTGLPAGTYCD 449
            |||||.|||.|||.|......||:|:||||::|.||:|||:.||||::..:.:||||||||||||
Human   402 RWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCD 466

  Fly   450 VISGSKSGSSCTGKTVTVGSDGRASIYIGSSEDDGVLAIHVNAKL 494
            ||||.|...:|||..:.|..||:|...|.:|.:|..:|||..:||
Human   467 VISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAESKL 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-dNP_523768.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 216/393 (55%)
Alpha-amylase 54..342 CDD:278554 171/300 (57%)
Aamy_C 405..493 CDD:214749 47/87 (54%)
AMY1BNP_001008219.1 AmyAc_bac_euk_AmyA 25..416 CDD:200456 216/393 (55%)
Aamy_C 422..510 CDD:214749 47/87 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 268 1.000 Domainoid score I1866
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 550 1.000 Inparanoid score I1140
Isobase 1 0.950 - 0 Normalized mean entropy S3326
OMA 1 1.010 - - QHG53143
OrthoDB 1 1.010 - - D231864at33208
OrthoFinder 1 1.000 - - FOG0000926
OrthoInspector 1 1.000 - - mtm8522
orthoMCL 1 0.900 - - OOG6_103366
Panther 1 1.100 - - O PTHR43447
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X338
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.790

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