DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amy-d and C50B6.7

DIOPT Version :9

Sequence 1:NP_523768.1 Gene:Amy-d / 36932 FlyBaseID:FBgn0000078 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_506303.1 Gene:C50B6.7 / 179813 WormBaseID:WBGene00008220 Length:713 Species:Caenorhabditis elegans


Alignment Length:500 Identity:218/500 - (43%)
Similarity:292/500 - (58%) Gaps:39/500 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TNYASGRSGMVHLFEWKWDDIAAECENFLGPNGYAGVQVSPVNENA---VKDSRPWWERYQPISY 83
            |.....|..|||||||||.|:|.||||||...||..|||||..|:.   ..::.|||.||||:||
 Worm    25 TQTLQNRQTMVHLFEWKWADVAKECENFLQYYGYGAVQVSPPMEHLKAFPNNNYPWWVRYQPVSY 89

  Fly    84 KLETRSGNEEQFASMVKRCNAVGVRTYVDVVFNHMAADGGTYGTG-GSTASPS------SKSYPG 141
            ||::|||||::|..||.|||.||||..||:|.|||...|...|.| ||:.|.|      .:|:||
 Worm    90 KLDSRSGNEQEFQDMVNRCNKVGVRIIVDIVMNHMVGIGQKSGNGVGSSGSSSFDGTHGVQSFPG 154

  Fly   142 VPYSSLDF-NPTC----AISNY-NDANEVRNCELVGLRDLNQGNSYVQDKVVEFLDHLIDLGVAG 200
            ||||..|| ||.|    ..|:| |.|..|::|.||||.||||.::.|:.|:|.:|:.|:|:||||
 Worm   155 VPYSLGDFNNPKCDGDIQGSDYQNSAEHVKDCRLVGLLDLNQASATVRAKIVAYLNKLVDMGVAG 219

  Fly   201 FRVDAAKHMWPADLAVIYGRLKNLNTDHGFASGSKAYIVQEVIDMGGEAISKSEYTGLGAITEFR 265
            ||.||:|||||.|:..|...:|:|.:|. :.|..:.:.|.||||.||||:...:|.|.|..|.|.
 Worm   220 FRHDASKHMWPQDILNILNDVKDLRSDI-YGSNQRPFAVHEVIDRGGEAVKCGDYFGNGRYTNFN 283

  Fly   266 HSDSIGKVFRGKDQLQYLTNWGTAWGFAASDRS--LVFVDNHDNQRGHGAGGADVLTYKVPKQYK 328
            ...::....:.:...:||.|.|..:|:..::..  |.|:|||||||.   ....|:|||..::|.
 Worm   284 FGAAVSAAAKQQSDWKYLANLGPGYGYGNNEDHDVLNFIDNHDNQRD---SSPYVVTYKDGQKYN 345

  Fly   329 MASAFMLAHPFGTPRVMSSFSFTDTDQGPPTTDGHN---IASPIFNSDNSC--SGGWVCEHRWRQ 388
            :|..||||.|:|.|||||||:|:.:||.||.:...|   ..||.||.|.:|  :.||||||||..
 Worm   346 LAVGFMLAWPYGYPRVMSSFAFSYSDQSPPNSGASNDYATTSPTFNGDQTCNSNSGWVCEHRWPA 410

  Fly   389 IYNMVAFRNAV----GLDEIQNWWDSGSNQISFSRGSRGFVAFNNDNYDLNSSLQTGLPAGTYCD 449
            |..|..||:||    ..|.:     :.:.:|:|:|..:||.|.|..:........|.||||.|||
 Worm   411 IRQMAKFRSAVQGTAAADIV-----TDTRRIAFARDGKGFFALNQQDGAWTKIFATNLPAGDYCD 470

  Fly   450 VISGSKSGSSCTGKTVTVGSDGRASIYIGSSEDDGVLAIHVNAKL 494
            ..||......|.|..:||..|..:.:.:.|   :.::||.:::||
 Worm   471 HFSGGLDNGKCVGTKITVRDDHTSYLSVPS---NSIVAISLDSKL 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-dNP_523768.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 187/393 (48%)
Alpha-amylase 54..342 CDD:278554 138/305 (45%)
Aamy_C 405..493 CDD:214749 25/87 (29%)
C50B6.7NP_506303.1 AmyAc_bac_euk_AmyA 31..421 CDD:200456 187/393 (48%)
AmyA 53..>354 CDD:223443 136/304 (45%)
Aamy_C 432..511 CDD:214749 25/81 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166884
Domainoid 1 1.000 207 1.000 Domainoid score I1680
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H134663
Inparanoid 1 1.050 384 1.000 Inparanoid score I1167
Isobase 1 0.950 - 0 Normalized mean entropy S3326
OMA 1 1.010 - - QHG53143
OrthoDB 1 1.010 - - D231864at33208
OrthoFinder 1 1.000 - - FOG0000926
OrthoInspector 1 1.000 - - otm14673
orthoMCL 1 0.900 - - OOG6_103366
Panther 1 1.100 - - LDO PTHR43447
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4468
SonicParanoid 1 1.000 - - X338
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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