DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amy-d and Amy2a3

DIOPT Version :9

Sequence 1:NP_523768.1 Gene:Amy-d / 36932 FlyBaseID:FBgn0000078 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001153623.1 Gene:Amy2a3 / 100043686 MGIID:3714985 Length:508 Species:Mus musculus


Alignment Length:510 Identity:281/510 - (55%)
Similarity:353/510 - (69%) Gaps:23/510 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KSIVCLSLLAVANAQFDTNYASGRSGMVHLFEWKWDDIAAECENFLGPNGYAGVQVSPVNENAV- 68
            |.::.|||:....||:|.:.:.||:.:||||||:|.|||.|||.:|.|.|:.||||||.|||.| 
Mouse     2 KFVLLLSLIGFCWAQYDPHTSDGRTAIVHLFEWRWVDIAKECERYLAPKGFGGVQVSPPNENVVV 66

  Fly    69 -KDSRPWWERYQPISYKLETRSGNEEQFASMVKRCNAVGVRTYVDVVFNHMAADG---GTYGTGG 129
             ..||||||||||||||:.||||||::|..||.|||.||||.|||.|.|||...|   ||..|.|
Mouse    67 HNPSRPWWERYQPISYKICTRSGNEDEFRDMVTRCNNVGVRIYVDAVINHMCGAGNPAGTSSTCG 131

  Fly   130 STASPSSKSYPGVPYSSLDFNPT-C--AISNYNDANEVRNCELVGLRDLNQGNSYVQDKVVEFLD 191
            |..:|:::.:|.||||:.|||.. |  .|.|||||.:||||.|.||.||.....||:.||.::::
Mouse   132 SYLNPNNREFPAVPYSAWDFNDNKCNGEIDNYNDAYQVRNCRLTGLLDLALEKDYVRTKVADYMN 196

  Fly   192 HLIDLGVAGFRVDAAKHMWPADLAVIYGRLKNLNTDHGFASGSKAYIVQEVIDMGGEAISKSEYT 256
            ||||:||||||:||||||||.|:..:..:|.|||| ..|:.||:.:|.|||||:|||||..|||.
Mouse   197 HLIDIGVAGFRLDAAKHMWPGDIKAVLDKLHNLNT-KWFSQGSRPFIFQEVIDLGGEAIKGSEYF 260

  Fly   257 GLGAITEFRHSDSIGKVFR--GKDQLQYLTNWGTAWGFAASDRSLVFVDNHDNQRGHGAGGADVL 319
            |.|.:|||::...:|.|.|  ..:::.||.|||..||...|||:|||||||||||||||||:.:|
Mouse   261 GNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGLVPSDRALVFVDNHDNQRGHGAGGSSIL 325

  Fly   320 TYKVPKQYKMASAFMLAHPFGTPRVMSSFSFTDTDQ---------GPPTTDGHNIASPI-FNSDN 374
            |:...:.||||..||||||:|..|||||:.:....|         |||..:|  :...: .|:|.
Mouse   326 TFWDARMYKMAVGFMLAHPYGFTRVMSSYRWNRNFQNGKDQNDWIGPPNNNG--VTKEVTINADT 388

  Fly   375 SCSGGWVCEHRWRQIYNMVAFRNAVGLDEIQNWWDSGSNQISFSRGSRGFVAFNNDNYDLNSSLQ 439
            :|...||||||||||.|||||||.|......||||:.|||::||||:|||:.||||::.|:::||
Mouse   389 TCGNDWVCEHRWRQIRNMVAFRNVVNGQPFSNWWDNNSNQVAFSRGNRGFIVFNNDDWALSATLQ 453

  Fly   440 TGLPAGTYCDVISGSKSGSSCTGKTVTVGSDGRASIYIGSSEDDGVLAIHVNAKL 494
            ||||||||||||||.|...:|||..|.|||||:|...|.:|.:|..:|||.::||
Mouse   454 TGLPAGTYCDVISGDKVDGNCTGLRVNVGSDGKAHFSISNSAEDPFIAIHADSKL 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-dNP_523768.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 218/390 (56%)
Alpha-amylase 54..342 CDD:278554 172/297 (58%)
Aamy_C 405..493 CDD:214749 52/87 (60%)
Amy2a3NP_001153623.1 AmyAc_bac_euk_AmyA 25..413 CDD:200456 218/390 (56%)
AmyA 46..>344 CDD:223443 171/298 (57%)
Aamy_C 420..507 CDD:214749 52/86 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833748
Domainoid 1 1.000 273 1.000 Domainoid score I1776
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H134663
Inparanoid 1 1.050 573 1.000 Inparanoid score I1047
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53143
OrthoDB 1 1.010 - - D231864at33208
OrthoFinder 1 1.000 - - FOG0000926
OrthoInspector 1 1.000 - - mtm8751
orthoMCL 1 0.900 - - OOG6_103366
Panther 1 1.100 - - LDO PTHR43447
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4468
SonicParanoid 1 1.000 - - X338
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

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