DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn53F and Serpina3a

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001161177.1 Gene:Serpina3a / 74069 MGIID:1921319 Length:422 Species:Mus musculus


Alignment Length:353 Identity:72/353 - (20%)
Similarity:149/353 - (42%) Gaps:53/353 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AQKNSQLPDELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGTHLSE-- 78
            |..|:.....||..:.....::||:||...|.:::..:.:|.:::..|:|.:.:.:..|...|  
Mouse    50 ASINTDFAFSLYKKLALKNPHKNIVFSPLSISAALALMSLGAKDNTLEEILEGLKFNLTETPEAD 114

  Fly    79 ------------YKPKTQ-KIFAMSVKKAPVAKSLTRFYVRQNMKMSTEYRVFMR---HTEGRAR 127
                        .:|:.| :|.|.:.           .::.:::::.||::...|   ..|....
Mouse   115 IHQNFGHLLQMLIQPENQVQINAGNA-----------LFIDKHLQILTEFKEKARALYKAEAFTA 168

  Fly   128 NIAFAREQLDEVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATYPREF 192
            :....||....:|.:...:...:|.::|.:  ...|:...|||.:.|...|..||:||.|:...|
Mouse   169 DFQLPREATKLINDYVRKQTQGKIKELVSD--LHRNTSMALVNFLNFQGFWNVTFDPEDTFLGNF 231

  Fly   193 RVNATKSVMIPMMHEDSKFAFGILGNLKATAVLVPFSH-GDLRMLLIKPDQPDGLAALQMKLQAM 256
            .::..::|.:||| :..:.......:.:..:.::..:: |:...|.|.||| ..:..::..||..
Mouse   232 TLDRKRTVNVPMM-KTEELTTNYFRDEEMQSTVMELNYIGNASFLFILPDQ-GRIQHVEDSLQPQ 294

  Fly   257 NILSVARNL--TMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTNFRIDGV 319
            ::....::|  .|:|. :.:|||.:..|..|:....::|||::|......|.:.... |.|:..:
Mouse   295 SLRKWRKSLRPRMLDE-LSLPKFSLSQDYNLNDILPELGIKEVFSTQADLSGITGAK-NIRVSQM 357

  Fly   320 IHVVTFEFQEQGIGTPSTDVGNGSLTHT 347
            ||....:..|               |||
Mouse   358 IHQAALDVTE---------------THT 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 70/344 (20%)
Serpina3aNP_001161177.1 SERPIN 53..416 CDD:294093 71/350 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.