DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn53F and Serpina3a

DIOPT Version :10

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001161177.1 Gene:Serpina3a / 74069 MGIID:1921319 Length:422 Species:Mus musculus


Alignment Length:353 Identity:72/353 - (20%)
Similarity:149/353 - (42%) Gaps:53/353 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AQKNSQLPDELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGTHLSE-- 78
            |..|:.....||..:.....::||:||...|.:::..:.:|.:::..|:|.:.:.:..|...|  
Mouse    50 ASINTDFAFSLYKKLALKNPHKNIVFSPLSISAALALMSLGAKDNTLEEILEGLKFNLTETPEAD 114

  Fly    79 ------------YKPKTQ-KIFAMSVKKAPVAKSLTRFYVRQNMKMSTEYRVFMR---HTEGRAR 127
                        .:|:.| :|.|.:.           .::.:::::.||::...|   ..|....
Mouse   115 IHQNFGHLLQMLIQPENQVQINAGNA-----------LFIDKHLQILTEFKEKARALYKAEAFTA 168

  Fly   128 NIAFAREQLDEVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATYPREF 192
            :....||....:|.:...:...:|.::|.:  ...|:...|||.:.|...|..||:||.|:...|
Mouse   169 DFQLPREATKLINDYVRKQTQGKIKELVSD--LHRNTSMALVNFLNFQGFWNVTFDPEDTFLGNF 231

  Fly   193 RVNATKSVMIPMMHEDSKFAFGILGNLKATAVLVPFSH-GDLRMLLIKPDQPDGLAALQMKLQAM 256
            .::..::|.:||| :..:.......:.:..:.::..:: |:...|.|.||| ..:..::..||..
Mouse   232 TLDRKRTVNVPMM-KTEELTTNYFRDEEMQSTVMELNYIGNASFLFILPDQ-GRIQHVEDSLQPQ 294

  Fly   257 NILSVARNL--TMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTNFRIDGV 319
            ::....::|  .|:|. :.:|||.:..|..|:....::|||::|......|.:.... |.|:..:
Mouse   295 SLRKWRKSLRPRMLDE-LSLPKFSLSQDYNLNDILPELGIKEVFSTQADLSGITGAK-NIRVSQM 357

  Fly   320 IHVVTFEFQEQGIGTPSTDVGNGSLTHT 347
            ||....:..|               |||
Mouse   358 IHQAALDVTE---------------THT 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 serpin42Dd-like_insects 20..379 CDD:381070 70/349 (20%)
Serpina3aNP_001161177.1 serpinA3_A1AC 39..419 CDD:381019 72/353 (20%)

Return to query results.
Submit another query.