DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn53F and Spn43Ab

DIOPT Version :10

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster


Alignment Length:396 Identity:99/396 - (25%)
Similarity:181/396 - (45%) Gaps:33/396 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLLILLGISRYR------AQKNSQLPDELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDES 62
            |||:|..:|:.:      |...:.|..:||.|:.....|.|::.|...|:|||...:||.:...:
  Fly     8 LLLLLATVSQSKTVGYDAAADRNLLAADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTA 72

  Fly    63 EQIRKAMHYRGTHLSEYKPKTQKIFAMSVKKAPVAKSLTR---------FYVRQNMKMSTEYR-V 117
            .::::.:.. |...::         |:|.:.....::|||         .|:.:|::....:| |
  Fly    73 SELQQGLRL-GPGDAD---------AVSQRSGSYQQALTRDNNFRLANNIYINENLEFKGSFRDV 127

  Fly   118 FMRHTEGRARNIAF----AREQLDEVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSW 178
            ..|..:.....:.|    .:...|.:|...:.:...:|..:::.......::|::||.:.::.:|
  Fly   128 AQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAW 192

  Fly   179 ERTFNPEATYPREFRVNATKSVMIPMMHEDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQP 243
            ::.|..:.|..|.||..:.:||.:..|.....|.:..:.:|.|..|.:|:.:.|..|||:.|::.
  Fly   193 QKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRK 257

  Fly   244 DGLAALQMKLQAMNILSVARNLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLL 308
            |||.:||..|...|:|:....::...|.|.:|||.:...|.|...|:|:|:..:|.....|..:.
  Fly   258 DGLRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMY 322

  Fly   309 HRNTNFRIDGVIHVVTFEFQEQGIGTPSTDVGNGSLTHTFNGVKYFLATHPFAFYIIDNTSIYFA 373
            ....:..|:.|.|....|..|.|:..|   :..|.|...|:..|.|.|.|||.|.|....||.|.
  Fly   323 RMFVSHFINAVEHKANVEVTEAGVDQP---LETGLLKGLFSRSKKFEADHPFVFAIKYKDSIAFI 384

  Fly   374 GHVTSF 379
            ||:.::
  Fly   385 GHIANY 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 serpin42Dd-like_insects 20..379 CDD:381070 93/372 (25%)
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 93/375 (25%)

Return to query results.
Submit another query.