DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpinb3d

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_958764.1 Gene:Serpinb3d / 394252 MGIID:2683295 Length:387 Species:Mus musculus


Alignment Length:394 Identity:93/394 - (23%)
Similarity:173/394 - (43%) Gaps:49/394 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ELYAAIVNSF----------SNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGTHLSEY 79
            :|:|.....|          |:.||.:|...:..::..:.:|.:.:..:||:|.:|:     :|.
Mouse     2 DLFAVATTKFTLELYRQLRESDNNIFYSPISMMRTLAMLLLGAKANTEQQIKKVLHF-----NET 61

  Fly    80 KPKTQKIFAMSVKKAPVAKSLTRFYVRQNMKMSTEYRVFMRHTEGRARNIAFAREQLDEVNTFY- 143
            ..||.:..|.|..:..|.:.......:.| |.:..|.:.:.::...|::..|.:..|.::..:| 
Mouse    62 TKKTTEKSAESHDEENVHQQFQMLMTQLN-KFNNAYDLKVPNSIYGAKDFPFLQTFLKDIRKYYQ 125

  Fly   144 --------SHEMGEQIGQVVKESWWKPNSQG-----------------LLVNAIFFNLSWERTFN 183
                    :|...|...::  .||....:.|                 :||||::|...|...|:
Mouse   126 ANVESLDFAHAAEESQKKI--NSWMARQTNGKIKDLFPSGSLNSSTILVLVNAVYFKGQWNHKFD 188

  Fly   184 PEATYPREFRVNATKSVMIPMMHEDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQPDGLAA 248
            .:.|...:|.:|...|..:.||.:.:||.|..|.|::|..|.:|:...:|.|.::.|.:.|||..
Mouse   189 EKHTREEKFWLNKNTSKPVQMMKQRNKFNFIFLENVQAKIVEIPYKGKELSMFVLLPVEIDGLKK 253

  Fly   249 LQMKLQAMNIL--SVARNLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRN 311
            .:.:|.|..:|  :.|.|:.|.::::.:|:||:....:|....|.||:.|.|.|.|:..:.:..:
Mouse   254 FEEQLTADKLLQWTRAENMHMTELYLSLPQFKVEEKYDLRVPLEHMGMVDAFDPQKADFSGMSNS 318

  Fly   312 TNFRIDGVIHVVTFEFQEQGIGTPSTDVGNGSLTHTFNGVKYFLATHPFAFYIIDN--TSIYFAG 374
            ....:..|:|....|..|:| ...:|.:...|.:.:......|...|||.|.:..|  .||.|.|
Mouse   319 QGLVVSKVLHKSFVEVNEEG-AEAATAMSVESRSLSVPKPNDFSCNHPFLFVMKQNKTNSILFFG 382

  Fly   375 HVTS 378
            .|:|
Mouse   383 RVSS 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 91/390 (23%)
Serpinb3dNP_958764.1 SERPIN 7..387 CDD:294093 91/389 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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