DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpinb6b

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_038951899.1 Gene:Serpinb6b / 364705 RGDID:1310452 Length:388 Species:Rattus norvegicus


Alignment Length:391 Identity:94/391 - (24%)
Similarity:167/391 - (42%) Gaps:73/391 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHY-----RGTHLSEYKPKTQKIFAMSVKKA 94
            |::|::||...|.|.:..:::|.:...:.|:.:|:..     ||:.  :.....|.:.      |
  Rat    23 SSKNVLFSPLSISSGLAMVFMGAKGTTAHQMIQALSLDKCSGRGSR--DVHQGFQSLL------A 79

  Fly    95 PVAKSLTRFYVRQNMKMSTEYRVFMRHT---------------EGRARNIAF--AREQ-LDEVNT 141
            .|.|:.|::.::      |..|:|...|               |.....:.|  |.|| ...:||
  Rat    80 KVNKTGTQYLLK------TANRLFGEKTFDILASFKDACRKFYEAEMEELDFKGAPEQSRQHINT 138

  Fly   142 FYSHEMGEQIGQVVKESWWKPNSQG-----------------LLVNAIFFNLSWERTFNPEATYP 189
            :.:.:..   ||.:..:|   |||.                 :|||||:|..:|::.||.|.|..
  Rat   139 WVAKKTE---GQSISLNW---NSQKKITELLSSGSVNANTPLVLVNAIYFKGNWKKQFNKEDTQE 197

  Fly   190 REFRVNATKSVMIPMMHEDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQPDGLAALQMKLQ 254
            ..|:|...:...:.||.:.|.|....:..:..|.:|:|:...:|.|:::.||:...|..::.::.
  Rat   198 MPFKVTKNEEKPVKMMFKKSTFKMTYVEEISTTILLLPYVGNELNMIIMLPDEHIELRMVEKEIT 262

  Fly   255 AMNILSVARNLTMM---DVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKS-FSTLLHRNTNFR 315
            ....:... :|..|   :|.|.:||||:..:.::.....::|:.|.|:...: ||.:..:...| 
  Rat   263 YKKFIEWT-SLDKMEEREVEVFLPKFKLEENHDMKDVLHRLGMTDAFEQGMADFSGIASKEGLF- 325

  Fly   316 IDGVIHVVTFEFQEQGIGTPSTDVGNGSLTHTFN-GVKYFLATHPFAFYIIDN--TSIYFAGHVT 377
            :..|||....|..|:|....:....|    .||. .|.||.|.|||.|:|..:  ..|.|.|..:
  Rat   326 LSKVIHKSFVEVNEEGTEAAAATAAN----VTFRCMVPYFCANHPFLFFIQHSRTNGIVFCGRFS 386

  Fly   378 S 378
            |
  Rat   387 S 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 93/387 (24%)
Serpinb6bXP_038951899.1 serpin 1..388 CDD:422956 94/391 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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