DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Spn28Dc

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster


Alignment Length:224 Identity:56/224 - (25%)
Similarity:85/224 - (37%) Gaps:60/224 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 LLVNAIFFNLSWERTFNPEATYPREFRVN--ATKSVM-IPMM--------HEDSKFAFGIL---- 216
            :|.||::|...||..|...||.|..|..|  .|:.|| :.||        |||.:....|:    
  Fly   288 ILANALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPY 352

  Fly   217 -GNLKATAVLVPFSHGDLRMLLIKPDQPDGLAALQMKLQAMNILSVARNLTMMDVFVGIPKFKIH 280
             |||....::.||. ..:|.|:          |||.:|.|..|.|:...:......|..||..:.
  Fly   353 RGNLSTMYIIQPFK-SSVRELM----------ALQKRLTADKIESMISRMYRRAALVAFPKMHLT 406

  Fly   281 SDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTNFR----------------------------ID 317
            ..:.|....::||:..||...::..:|:..|...|                            :|
  Fly   407 ESVNLKTVMQRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVD 471

  Fly   318 GVIHVVTFEFQEQGIGTPSTDVGNGSLTH 346
            .::|.|.|...|||     |:....|:|:
  Fly   472 DIVHKVDFTVNEQG-----TEAAASSVTY 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 56/224 (25%)
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 56/224 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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