DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpinb1b

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_038952280.1 Gene:Serpinb1b / 306891 RGDID:1560658 Length:380 Species:Rattus norvegicus


Alignment Length:385 Identity:93/385 - (24%)
Similarity:172/385 - (44%) Gaps:38/385 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NSQLPDELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDES-EQIRKAMHYRGTHLSEYKPK 82
            ||....||:..:..|....|| ||...|.|::..:::|.:...: ..:|.|..:....:.:...:
  Rat     8 NSLFALELFHTLSESSPTGNI-FSPFSISSALAMVFLGAKGSSAPSSLRLAETFHFDSVEDIHSR 71

  Fly    83 TQKIFAMSVKKAPVAKSL---TRFYVRQNMKMSTEY-------------RVFMRHTEGRARNIAF 131
            .|.:.| .::|...:.:|   .|.|..:......|:             .|..:|....||.   
  Rat    72 FQSLNA-EMRKHGASHTLKVANRLYGEKTYNFLPEFLASTQKMYGADLAPVDFQHASEDARK--- 132

  Fly   132 AREQLDEVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATYPREFRVNA 196
                  |:|.:...:...:|.:::........::.:|||||:|...|:..|....|....||:|.
  Rat   133 ------EINKWVKGQTEGKIPELLAGGVVNSTTKLVLVNAIYFKGIWQEKFLTRHTTDAPFRLNK 191

  Fly   197 TKSVMIPMMHEDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKP----DQPDGLAAL--QMKLQA 255
            ..:.|:.||::..||.||.:.:||...:.:|:..|:|.|:::.|    |:..||..:  |:.|:.
  Rat   192 KDTKMVKMMYQKEKFPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLQKIEEQLTLEK 256

  Fly   256 MNILSVARNLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTNFRIDGVI 320
            :...:...||..:||.|.:|||||.....|:....::|::|:|..||:..:.:..:.:..|..::
  Rat   257 LYEWTKHENLKEIDVHVNLPKFKIEESYILNSNLGRLGLQDLFSSSKADLSGMSESRDIFISKIV 321

  Fly   321 HVVTFEFQEQGIGTPSTDVGNGSLTHTFNGVKYFLATHPFAFYIIDN--TSIYFAGHVTS 378
            |....|..|:  ||.:.....|.:.:....::.|:..|||.|:|..|  .::.|.|.|.|
  Rat   322 HKSFVEVNEE--GTEAAAATAGLVEYCLVSIEAFIVDHPFLFFIRHNPTANMLFFGRVCS 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 89/375 (24%)
Serpinb1bXP_038952280.1 serpinB1_LEI 1..380 CDD:381028 93/385 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.030

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