DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn53F and Serpinb13

DIOPT Version :10

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_063128285.1 Gene:Serpinb13 / 304690 RGDID:1304661 Length:390 Species:Rattus norvegicus


Alignment Length:389 Identity:83/389 - (21%)
Similarity:169/389 - (43%) Gaps:59/389 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMH-YRGTHLSEYKPKTQKIFAMSVKKA 94
            :|..|:.|:.||...|.:::..|.:|.:...:.:::|.:: .:||..|..|.:.:::    ::|.
  Rat    19 LNKTSDGNVFFSPLGISTAIGMILLGTQGATASELQKVLYSEQGTGSSRLKSEEKEV----IEKT 79

  Fly    95 PVAKSLTRFYVRQNMKMSTEYRVFMRHTEGRARNIAFAREQLD---------------------- 137
            .......:..:.:..|.:.:|.:.:.:.....|...|.::.:|                      
  Rat    80 EEIHHQFQKLLTEISKPTKDYDLIISNRLYGERTYLFLQKYIDYVEKYYHASLEPVDFVNAADES 144

  Fly   138 --EVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATYPREFRVNATKSV 200
              ::|::...:..|::..:..|.....:::.:|:|.::|...|:|.|..|.|...:|.:|...|.
  Rat   145 RKKINSWVESQTNEKVKDLFPEGSLNSSTKLVLINTVYFKGLWDREFKKEHTKEEDFWLNKNISK 209

  Fly   201 MIPMMHEDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQPDGLAALQMKLQAMNIL--SVAR 263
            .:.||.:.|.|:|.:|.:|:|..|.:|:.:.|..|.::.|:..|||..:..||....::  :...
  Rat   210 PVQMMAQCSSFSFTLLEDLQAKIVGIPYKNSDFSMFVLLPNDIDGLEKIIDKLSPEKLVEWTSPG 274

  Fly   264 NLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTNFRIDGVIH----VVT 324
            .|....|.:.:|:.|:....:|.|..|.:||...|.....:|. :..::..:....:|    |||
  Rat   275 QLKQRKVDLRLPRLKVEETYDLQPTLEAVGIHSAFSEHADYSG-MSAHSGLQTQNFLHRSFLVVT 338

  Fly   325 FEFQEQGI-GTPSTDVG-------NGSLTHTFNGVKYFLATHPFAFYI--IDNTSIYFAGHVTS 378
                |:|: .|..|.||       :..|.|         ..|||.|::  .::.||.|.|..:|
  Rat   339 ----EEGVEATAGTGVGFKVLSAASCELVH---------CNHPFLFFVRHRESDSILFFGRFSS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 serpin42Dd-like_insects 20..379 CDD:381070 83/389 (21%)
Serpinb13XP_063128285.1 None

Return to query results.
Submit another query.