DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpinb11

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_006249694.2 Gene:Serpinb11 / 304689 RGDID:1306497 Length:522 Species:Rattus norvegicus


Alignment Length:384 Identity:83/384 - (21%)
Similarity:161/384 - (41%) Gaps:28/384 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NSQLPDELYAAIVNSFSNRNIMFS--TEMIRSSMLFIYVGVEEDESEQIRKAMHYRG-THLSEYK 80
            |::...:::..:.:|....||.||  |.....|||.:  |.....:||:.|.:||.. :...:.|
  Rat   142 NTEFCLDVFKELSSSNVGENIFFSPLTTFYALSMLLL--GARGKSAEQMEKVLHYDNFSGFLKAK 204

  Fly    81 PKTQKIFAMSVKKAPVAKSLTRFYVRQNMKMSTEYRV-----------FMRHTE----GRARNIA 130
            .|.....:...:..|..::|.. ::.|...:|...|:           ::|..|    .:.:.:.
  Rat   205 IKNSSECSQGGRMHPEFRALVS-HINQQNSLSIANRIYGTKAIEFHKQYIRCCEKLYQAKLQTVD 268

  Fly   131 F---AREQLDEVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATYPREF 192
            |   |.|....:|.:..::...:|..:..:....|:|..:||:||:|...|:..|....|....|
  Rat   269 FELSAEETRKSINAWVENKTHGKITNLFDKGTIDPSSVMVLVSAIYFKGQWQNKFQKTETVKAPF 333

  Fly   193 RVNATKSVMIPMMHEDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQPDGLAALQMKLQAMN 257
            .::..||.::.||::...|....:...:...:.:|:::..|||:::.|.....:..::..|.|..
  Rat   334 HISVGKSAVVDMMYQTGTFKLAFIKEPQMQVLELPYANNKLRMIILLPVGTASVNQIEKHLNAKM 398

  Fly   258 ILSVARNLTMMD--VFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTNFRIDGVI 320
            :........|::  |.|.||||.:....:|:...:.:|:.|||..:|:..:.:..:....:..|:
  Rat   399 LREWTSPSNMVERVVDVHIPKFSLSVKYDLNTLLKSLGMSDIFNVAKADLSGMSPDKGLYLSKVV 463

  Fly   321 HVVTFEFQEQGIGTPSTDVGNGSLTHTFNGVKYFLATHPFAFYIIDN-TSIYFAGHVTS 378
            |....:..|:|....:. .|.............|.|..||.|:|.|. .:|.|||...|
  Rat   464 HKSYVDVNEEGTEAAAA-TGETISVKRLPVTVQFTANCPFLFFIWDEFYNILFAGKFAS 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 81/374 (22%)
Serpinb11XP_006249694.2 SERPIN 138..522 CDD:294093 83/384 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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