DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpinb3

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001382662.1 Gene:Serpinb3 / 304688 RGDID:1549766 Length:387 Species:Rattus norvegicus


Alignment Length:395 Identity:95/395 - (24%)
Similarity:172/395 - (43%) Gaps:45/395 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AQKNSQLPDELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGTHLSEYK 80
            |:..:|...|||..:.:  |..||.:|...|.:::..:.:|.:.:..:||.||:     .|||..
  Rat     5 AKATTQFTLELYRQLRD--SEDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKAL-----QLSETT 62

  Fly    81 PKTQKIFAMSVKKAPVAKSLTRFYVRQNMKMSTEYRVFMRHTEGRARNIAFAREQLDEVNTFY-- 143
            .|.::..|.|..:..|.:.. |..:.|..|.:..|.:...::...|:...|.:..::::..:|  
  Rat    63 KKPKEKSADSHDEENVHEQF-RKIMNQLNKSNGAYDLKSPNSIYGAKGFPFLQTFMEDIKKYYQA 126

  Fly   144 -------SHEMGEQIGQVVKESWWKPNSQG-----------------LLVNAIFFNLSWERTFNP 184
                   :|...|...::  .||.:..:.|                 :||||::|...|...|:.
  Rat   127 NVESLDFAHAAEESQKKI--NSWVENKTNGKIKDLFPRGSLNSSTILVLVNAVYFKGQWNHKFDE 189

  Fly   185 EATYPREFRVNATKSVMIPMMHEDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQPDGLAAL 249
            :.|...:|.:|...|..:.||.:.::|.|..|.:::|..|.:|:...:|.|.::.|.:.|||..|
  Rat   190 QRTREDKFWLNKNTSKPVQMMRQTNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKL 254

  Fly   250 QMKLQAMNIL--SVARNLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNT 312
            :.||.|..:|  :..:|:.|..:.:.:|:||:....:|....|.||:.|.|.|.|:..:.:....
  Rat   255 EEKLSADTLLAWTSPKNMRMTQLNLSLPRFKVQEKYDLPGPLEHMGMVDAFNPQKADFSGMSSTK 319

  Fly   313 NFRIDGVIHVVTFEFQEQGIGTPSTDVGNGSLTHTFNGVK--YFLATHPFAFYIIDN--TSIYFA 373
            ...:..|:|....|..|:|   .......|..|...:..:  .|....||..:|..|  .||.|.
  Rat   320 GLVVSKVLHKSFLEVNEEG---AEAAAATGVETRILSAPRTTEFTCNRPFIVFIKPNNTNSILFF 381

  Fly   374 GHVTS 378
            |.|:|
  Rat   382 GRVSS 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 91/382 (24%)
Serpinb3NP_001382662.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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