DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn53F and serpinh1b

DIOPT Version :10

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_571279.2 Gene:serpinh1b / 30449 ZFINID:ZDB-GENE-990415-93 Length:405 Species:Danio rerio


Alignment Length:383 Identity:85/383 - (22%)
Similarity:162/383 - (42%) Gaps:42/383 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AQKNSQLPDELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAM-------HYRG 73
            |..::.|...||..:.......||:.|..::.||:..:.:|.:...:.|::..:       .:..
Zfish    31 ADTSANLAFNLYHNVAKEKGLENILISPVVVASSLGMVAMGSKSSTASQVKSVLKADALKDEHLH 95

  Fly    74 THLSEY-----KPKTQKI-FAMSVK-KAPVAKSLTRFYVRQNMKMSTEYRVFMRHTEGRARNIAF 131
            |.|||.     .|:|:.: :.:|.: ..|.:.|....:|: |.|....|    .|::...|:   
Zfish    96 TGLSELLTEVSDPQTRNVTWKISNRLYGPSSVSFAEDFVK-NSKKHYNY----EHSKINFRD--- 152

  Fly   132 AREQLDEVNTFYSHEMGEQIGQVVKESWWKPNSQG-LLVNAIFFNLSWERTFNPEATYPREFRVN 195
            .|..::.:|.:.:.....::.::.|:   ..|:.| ::|||:||...|:..|:.:....|.|.|.
Zfish   153 KRSAINSINEWAAKTTDGKLPEITKD---VKNTDGAMIVNAMFFKPHWDEKFHHKMVDNRGFLVT 214

  Fly   196 ATKSVMIPMMHEDSKFAFGILGNLKAT-----AVLVPFSHGDLRMLLIKPDQPDGLAALQMKLQA 255
            .:.:|.:||||..     ||.|..:.|     .|.:|.:|....|:.|.|...:.|..|:..|..
Zfish   215 RSHTVSVPMMHRT-----GIYGFYEDTENRFLIVSMPLAHKKSSMIFIMPYHVEPLDRLENLLTR 274

  Fly   256 MNILSVARNLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTNFRIDGVI 320
            ..:.:....|....|.:.:||..:....:|.....::|:.:....||:..:.:....:..:..|.
Zfish   275 QQLDTWISKLEERAVAISLPKVSMEVSHDLQKHLGELGLTEAVDKSKADLSNISGKKDLYLSNVF 339

  Fly   321 HVVTFEFQEQGIGTPSTDVGNGSLTHTFNGVKYFLATHPFAFYIIDN--TSIYFAGHV 376
            |..:.|:..:|.....:..|:..:.:.    |.|.|.|||.|.:.||  .||.|.|.:
Zfish   340 HASSLEWDTEGNPFDPSIFGSEKMRNP----KLFYADHPFIFLVKDNKTNSILFIGRL 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 serpin42Dd-like_insects 20..379 CDD:381070 84/379 (22%)
serpinh1bNP_571279.2 serpin 23..404 CDD:476815 85/383 (22%)

Return to query results.
Submit another query.