DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and LOC299277

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_008763124.2 Gene:LOC299277 / 299277 RGDID:1595900 Length:420 Species:Rattus norvegicus


Alignment Length:359 Identity:72/359 - (20%)
Similarity:154/359 - (42%) Gaps:28/359 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AQKNSQLPDELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGTHLSE-- 78
            |..|:.....||..:.....|:||.||...|.:::..:.:|.:.:..::|.:.:.:..|..:|  
  Rat    48 ASINTDFAFSLYKELALKNPNKNIAFSPLSISAALASLSLGAKGNTLQEILEGLKFNLTETTEID 112

  Fly    79 ----YKPKTQKIFAMSVKKAPVAKSLTRFYVRQNMKMSTEYR---VFMRHTEGRARNIAFAREQL 136
                |:...|:: :....:..:::: ...:|.:::::...::   ..:..||..|.:.....|..
  Rat   113 IHQNYRDLLQRL-SQPGGQGQISRA-NLLFVEKHLQILNGFKEKAKALYQTEVFATDFQQTCEAR 175

  Fly   137 DEVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATYPREFRVNATKSVM 201
            ..:|.:...:...:|.::|.|  .:..:..:::|.:.|...|...|:|:.|:..:|.:::.:.|.
  Rat   176 KFINDYVMIQSQGKIKEMVTE--LEERTSIVMLNFLLFTGQWSVPFDPDDTFMGKFILDSRRPVK 238

  Fly   202 IPMMH-EDSKFAFGILGNLKATAVLVPF-SHGDLRMLLIKPDQPDGLAALQMKLQAMNILSVARN 264
            :.||. ||....:.....||.|.|.:.: .||  :.:.|.||| ..:..::..|....:.....:
  Rat   239 VLMMKTEDLTTPYFWDEELKCTVVELNYKGHG--KAMFILPDQ-GKMEQVEASLHPGTLRKWTDS 300

  Fly   265 L--TMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTNFRIDGVIHVVTFEF 327
            |  .::|. :.:|||.:....:|.....::||.|:|......|.:.... :.|:..:||......
  Rat   301 LKPRIIDE-LHLPKFSLSKTYKLENILPELGIMDVFNTQADLSGIAGAK-DVRVSQMIHNTVLGM 363

  Fly   328 QEQGIGTPST-----DVGNGSLTHTF-NGVKYFL 355
            .|.|....:|     :.....|..|| |.|:.||
  Rat   364 AETGTEAEATTRVEYNFRPAKLNDTFVNFVRKFL 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 70/350 (20%)
LOC299277XP_008763124.2 serpinA3_A1AC 37..417 CDD:381019 72/359 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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