DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpinb6a

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_006253933.1 Gene:Serpinb6a / 291085 RGDID:735108 Length:400 Species:Rattus norvegicus


Alignment Length:374 Identity:91/374 - (24%)
Similarity:170/374 - (45%) Gaps:48/374 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHY---RGTHLSEYKPKTQKIFAMSVKKAPV 96
            |:.||..|...|.:::..:::|.:...:.|:.:.:..   .|....:.....|.:.      |.|
  Rat    44 SSNNIFLSPISISAALTMVFMGAKGMTASQMVQTLSLDKCSGNGGGDVHQGFQSLL------AEV 102

  Fly    97 AKSLTRFYVRQNMKMSTEYRVFMRHT-------EGRARNIAFAR-EQLD----------EVNTFY 143
            .|:.|::.::      |..|:|...|       :...|....|. |:||          .:||:.
  Rat   103 NKTGTQYLLK------TANRLFGEKTCDILASFKDACRKFYEAEMEELDFKGDTEQSRQRINTWV 161

  Fly   144 SHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATYPREFRVNATKSVMIPMMHED 208
            :.:..::|.:::......|::..:|||||:|..:|::.||.|.|..:.|:|:.|:...:.||...
  Rat   162 AKKTEDKIKELLAPGIVDPDTVLVLVNAIYFKGNWDKQFNKEHTREKPFKVSKTEEKPVQMMFMK 226

  Fly   209 SKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQPDGLAALQMKLQAMNILSVARNLTMMD---V 270
            |.|....:|.:....:|:|::..:|.|:::.||:...|..::.:|.....:...| |.|:|   |
  Rat   227 STFKMTYIGEIFTKILLLPYAGNELNMIIMLPDEHIELKTVEKELTYEKFIEWTR-LDMLDEEEV 290

  Fly   271 FVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKS-FSTLLHRNTNFRIDGVIHVVTFEFQEQGIGT 334
            .|.:|:||:..:.::.....|:|:.|.|...:: ||.:..:...| :..|||....|..|:|   
  Rat   291 EVFLPRFKLEENYDMKVVLGKLGMTDAFMEGRADFSGIASKQGLF-LSKVIHKAFVEVNEEG--- 351

  Fly   335 PSTDVGNGSLTHTFNGVKY---FLATHPFAFYI--IDNTSIYFAGHVTS 378
            .......|| |.|...:::   |||.|||.|:|  :....|.|.|..:|
  Rat   352 TEAVAATGS-TITMRCLRFTPRFLADHPFLFFIQHVKTKGILFCGRFSS 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 90/370 (24%)
Serpinb6aXP_006253933.1 SERPIN 25..400 CDD:294093 91/374 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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