DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn53F and Serpinf2

DIOPT Version :10

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001011892.1 Gene:Serpinf2 / 287527 RGDID:1306692 Length:491 Species:Rattus norvegicus


Alignment Length:384 Identity:74/384 - (19%)
Similarity:148/384 - (38%) Gaps:66/384 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SRYRAQKNSQLPDELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGTHL 76
            :|..:|.......:|::.:..:.::.|::.|...:..::..:.:|......|.:::.:|   .::
  Rat    79 TRRLSQAMMAFTTDLFSLVAQTSTSSNLVLSPLSVALALSHLALGARNQTLENLQRVLH---MNM 140

  Fly    77 SEYKPKTQKIFAMSVKKAPVAKSLTRFYVRQNMKMSTEYRVFMRHTE-----------GRARNIA 130
            ....|.....|..::....: :...|.|:::...:..:   |:..:|           ||     
  Rat   141 GSCIPHLLSHFCQNLNPGTI-RLAARIYLQKGFPIKDD---FLEQSEKLFGAKPVKLTGR----- 196

  Fly   131 FAREQLDEVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATYPREFRVN 195
             ..|.|..:|.:.......:|...:.|  ...|:..||:|||.|:..|...|:|..|....|.::
  Rat   197 -QEEDLMNINKWVKEATEGKIEDFLSE--LPDNTVLLLLNAIHFHGFWRTKFDPSLTQKDSFHLD 258

  Fly   196 ATKSVMIPMMHEDS-KFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQPDGLAALQMKLQAMNIL 259
            ...:|.:.|||..| ...:.:|...:......||.: ::..::|.|           .....|:.
  Rat   259 EQFTVPVAMMHAQSYPLRWFLLEQPEIQVAHFPFQN-NMSFVVIMP-----------TYFGWNVS 311

  Fly   260 SVARNLTMMDVF----------VGIPKFKIHSDLELSPAFEKMGIKDIFKPS--KSFSTLLHRNT 312
            .|..|||...::          |.:||..:...|:|.....|:|::|:|:..  :..|     :.
  Rat   312 EVLANLTWDTLYQPSMREKPTKVRLPKLHLEQHLDLVATLSKLGLQDLFQSPDLRGIS-----DQ 371

  Fly   313 NFRIDGVIHVVTFEFQEQGI---GTPSTDVGNGSLTHTFNGVKYFLATHPFAFYIIDNT 368
            :..:..|.|..|.|..|.|:   ...||.:...||:.       |....||.|:|::.|
  Rat   372 SLVVSSVQHQSTMELSEAGVEAAAATSTAMTRMSLSS-------FFLNRPFIFFIMEET 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 serpin42Dd-like_insects 20..379 CDD:381070 72/376 (19%)
Serpinf2NP_001011892.1 serpinF2_A2AP 75..438 CDD:381009 74/384 (19%)

Return to query results.
Submit another query.