DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpinf1

DIOPT Version :10

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_808788.1 Gene:Serpinf1 / 287526 RGDID:631369 Length:418 Species:Rattus norvegicus


Alignment Length:361 Identity:74/361 - (20%)
Similarity:160/361 - (44%) Gaps:21/361 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGTHLSEYKPKTQKIFAM 89
            :||.....:.|..||:.|...:.:::..:.:|.|:.....|.:|::|...:..:.....:::.|.
  Rat    64 DLYRLRSGAVSTGNILLSPLSVATALSALSLGAEQRTESVIHRALYYDLINNPDIHSTYKELLAS 128

  Fly    90 SVKKAPVAKSLTRFYVRQNMKMSTEYRVFMRHTEGRARNIAFAREQLD--EVNTFYSHEMGEQIG 152
            ........||.:|....:.:::.:.:...:..:.|....|.....::|  |:|.:...:|..:|.
  Rat   129 VTAPEKNFKSASRIVFERKLRVKSSFVAPLEKSYGTRPRILTGNPRIDLQEINNWVQAQMKGKIA 193

  Fly   153 QVVKESWWKPNSQG-LLVNAIFFNLSWERTFNPEATYPREFRVNATKSVMIPMMHEDSK--FAFG 214
            :..:|   .|::.. ||:...:|...|...|:...|..::|.::..::|.:||| .|.|  ..:|
  Rat   194 RSTRE---MPSALSILLLGVAYFKGQWATKFDSRKTTLQDFHLDEDRTVRVPMM-SDPKAILRYG 254

  Fly   215 ILGNLKATAVLVPFSHGDLRMLLIKP-DQPDGLAALQMKLQAMNILSVARNLTMMDVFVGIPKFK 278
            :..:|......:|.: |.:.::...| .....|..::..|.:..:..:.|.|..:...:.:||.|
  Rat   255 LDSDLNCKIAQLPLT-GSMSIIFFLPLTVTQNLTMIEESLTSEFVHDIDRELKTIQAVLTVPKLK 318

  Fly   279 IHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTNFRIDGVIHVVTFEFQEQGIGTPST-DVGNG 342
            :..:.:::.:.:.|.::.:|: |..||.:..:..  ::..|.|...||:.|:|.||.|. |:...
  Rat   319 LSYEGDVTNSLQDMKLQSLFE-SPDFSKITGKPV--KLTQVEHRAAFEWNEEGAGTSSNPDLQPV 380

  Fly   343 SLTHTFNGVKYFLATHPFAFYI--IDNTSIYFAGHV 376
            .||...:   |.| ..||.|.:  .|..::.|.|.:
  Rat   381 RLTFPLD---YHL-NRPFIFVLRDTDTGALLFIGRI 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 serpin42Dd-like_insects 20..379 CDD:381070 74/361 (20%)
Serpinf1NP_808788.1 serpinF1_PEDF 41..413 CDD:381008 74/361 (20%)

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