DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpina4

DIOPT Version :10

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:395 Identity:95/395 - (24%)
Similarity:157/395 - (39%) Gaps:44/395 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ISRYR-AQKNSQLPDELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGT 74
            ||.|: |..|:.....||..|.:..|.:||.||...|..|:..:..|...|...||.:.:.:..|
  Rat    43 ISSYQIASGNANFAFRLYHLIASQNSEKNIFFSPLSISVSLAILSTGAGGDTQAQILEGLGFNLT 107

  Fly    75 HLSEYKPKTQKIFAMSVKKAPVAKSLTR--------FYVRQNMK--------MSTEYRVFMRHTE 123
            .||  .|:..:.| .|::.. :|:..|.        ..:.||::        :.|.|...:.|..
  Rat   108 KLS--LPEIHEGF-RSLQHT-IARPFTEPQISVGSALILSQNLQILSEFVSAIETSYNSKVLHAN 168

  Fly   124 GRARNIAFAREQLDEVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATY 188
            .|.:..|.   ||  :|.:.......:|..:|.:  ..|:.:.:|||.|||...|::.|......
  Rat   169 FRDKEAAV---QL--INNYVKQNTQGKIKNLVSD--LSPDVKMVLVNYIFFQGLWKKPFPSSRVS 226

  Fly   189 PREFRVNATKSVMIPMMHEDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQ-----PDGLAA 248
            ..:|.|:....|.||||.:|.:..:.:........||.....||.....|.|||     .:.:.:
  Rat   227 TSDFYVDENTVVKIPMMLQDKEDHWYLEDRRVPCTVLRMDYRGDAVAFFILPDQGKMNEVEQVLS 291

  Fly   249 LQMKLQAMNILSVARNLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTN 313
            ..|.|:...:|.  .......:.:.:|||.|.:..||......:|.:|:|.|:.:||. :.:...
  Rat   292 PGMLLRWKRLLQ--NRFFYRKLILQLPKFSISNSYELDEILPDLGFQDLFTPNANFSN-ISKKEK 353

  Fly   314 FRIDGVIHVVTFEFQEQGIGTPSTDVGNGSLTHTFNG---VKYFLATHPF--AFYIIDNTSIYFA 373
            ..:..|.|....:..|  :||.:. ...||....|:.   .:|.:...||  ..|...:..|.|.
  Rat   354 LYLSKVFHKTVLDVNE--VGTKAA-AATGSFATFFSAQPKKRYLIFNRPFLVILYSTSSQDILFM 415

  Fly   374 GHVTS 378
            |.|.:
  Rat   416 GKVVN 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 serpin42Dd-like_insects 20..379 CDD:381070 90/385 (23%)
Serpina4NP_659565.2 serpinA4_KST 41..423 CDD:381020 95/395 (24%)

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