DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpina4

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:395 Identity:95/395 - (24%)
Similarity:157/395 - (39%) Gaps:44/395 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ISRYR-AQKNSQLPDELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGT 74
            ||.|: |..|:.....||..|.:..|.:||.||...|..|:..:..|...|...||.:.:.:..|
  Rat    43 ISSYQIASGNANFAFRLYHLIASQNSEKNIFFSPLSISVSLAILSTGAGGDTQAQILEGLGFNLT 107

  Fly    75 HLSEYKPKTQKIFAMSVKKAPVAKSLTR--------FYVRQNMK--------MSTEYRVFMRHTE 123
            .||  .|:..:.| .|::.. :|:..|.        ..:.||::        :.|.|...:.|..
  Rat   108 KLS--LPEIHEGF-RSLQHT-IARPFTEPQISVGSALILSQNLQILSEFVSAIETSYNSKVLHAN 168

  Fly   124 GRARNIAFAREQLDEVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATY 188
            .|.:..|.   ||  :|.:.......:|..:|.:  ..|:.:.:|||.|||...|::.|......
  Rat   169 FRDKEAAV---QL--INNYVKQNTQGKIKNLVSD--LSPDVKMVLVNYIFFQGLWKKPFPSSRVS 226

  Fly   189 PREFRVNATKSVMIPMMHEDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQ-----PDGLAA 248
            ..:|.|:....|.||||.:|.:..:.:........||.....||.....|.|||     .:.:.:
  Rat   227 TSDFYVDENTVVKIPMMLQDKEDHWYLEDRRVPCTVLRMDYRGDAVAFFILPDQGKMNEVEQVLS 291

  Fly   249 LQMKLQAMNILSVARNLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTN 313
            ..|.|:...:|.  .......:.:.:|||.|.:..||......:|.:|:|.|:.:||. :.:...
  Rat   292 PGMLLRWKRLLQ--NRFFYRKLILQLPKFSISNSYELDEILPDLGFQDLFTPNANFSN-ISKKEK 353

  Fly   314 FRIDGVIHVVTFEFQEQGIGTPSTDVGNGSLTHTFNG---VKYFLATHPF--AFYIIDNTSIYFA 373
            ..:..|.|....:..|  :||.:. ...||....|:.   .:|.:...||  ..|...:..|.|.
  Rat   354 LYLSKVFHKTVLDVNE--VGTKAA-AATGSFATFFSAQPKKRYLIFNRPFLVILYSTSSQDILFM 415

  Fly   374 GHVTS 378
            |.|.:
  Rat   416 GKVVN 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 89/376 (24%)
Serpina4NP_659565.2 SERPIN 52..418 CDD:294093 90/382 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.110

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