DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpinb6b

DIOPT Version :10

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_035584.1 Gene:Serpinb6b / 20708 MGIID:894688 Length:377 Species:Mus musculus


Alignment Length:370 Identity:89/370 - (24%)
Similarity:166/370 - (44%) Gaps:42/370 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHY--------RGTH------LSE-YKPKTQ 84
            |:||::||...:.|::..:::|.:...:.|:.:|:..        |..|      |:| .|..||
Mouse    23 SSRNVLFSPISVSSALAMVFMGAKGTTASQMAQALSLDKCSGKGGRDVHQGFQSLLTETNKTGTQ 87

  Fly    85 KIFAMSVKKAPVAKSLTRFYVRQNMKMSTEYRVFMR-HTEGRARNIAF--AREQ-LDEVNTFYSH 145
            .          |.::..|.:..:...:...::...| ..|.....:.|  |.|| ...:|.:.:.
Mouse    88 Y----------VLRTANRLFGEKTFDILASFKDSCRKFYEAEMEELDFKGATEQSRQHINAWVAK 142

  Fly   146 EMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATYPREFRVNATKSVMIP--MMHED 208
            :..::|.:::.......|:..:|||||:|..:||:.||.|.|  :|...|.||.|:.|  ||.:.
Mouse   143 KTEDKITELLSSGSVNSNTPLVLVNAIYFKGNWEKQFNKEDT--QEMPFNVTKDVVKPVQMMFQK 205

  Fly   209 SKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQPDGLAALQMKLQAMNILSVAR--NLTMMDVF 271
            |.|....:..:....:|:|:...:|.|:::.||:...|:.::.::.....:...|  .:...:|.
Mouse   206 STFKMTYVEEISTNILLLPYVGNELNMIIMLPDEHIELSMVEKEITYKKFIEWTRLDKMEEEEVE 270

  Fly   272 VGIPKFKIHSDLELSPAFEKMGIKDIFKPSKS-FSTLLHRNTNFRIDGVIHVVTFEFQEQGIGTP 335
            |.:||||:..:.::.....::|:.|.|:...: ||.:..:...| :..|||....|..|:|....
Mouse   271 VFLPKFKLEENYDMKDVLCRLGMTDAFEEGMADFSGIASKEGLF-LSKVIHKSFVEVNEEGTEAA 334

  Fly   336 STDVGNGSLTHTFNGVKYFLATHPFAFYIIDN--TSIYFAGHVTS 378
            :....|......   |.||.|.|||.|:|..:  :.|.|.|..:|
Mouse   335 AATAANIGFRCM---VPYFCANHPFLFFIQHSRTSGIVFCGRFSS 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 serpin42Dd-like_insects 20..379 CDD:381070 89/370 (24%)
Serpinb6bNP_035584.1 serpin 1..377 CDD:476815 89/370 (24%)

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