DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpina1d

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_033272.1 Gene:Serpina1d / 20703 MGIID:891968 Length:413 Species:Mus musculus


Alignment Length:381 Identity:83/381 - (21%)
Similarity:145/381 - (38%) Gaps:58/381 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGTHLSEYKPKTQKIFAMS 90
            ||..:|:..:..||.||...|.::...:.:|.:.|...||.:.:.:..|..||            
Mouse    55 LYRELVHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSE------------ 107

  Fly    91 VKKAPVAKSLTRFYVRQN-----MKMSTEYRVFMRHTEGRARNIAFAREQLDEVNTFYSHEM--- 147
               |.:.||........|     :::||...:|:.:      ::....:.|:|....|..|:   
Mouse   108 ---ADIHKSFQHLLQTLNRPDSELQLSTGNGLFVNN------DLKLVEKFLEEAKNHYQAEVFSV 163

  Fly   148 ----GEQIGQVVKESWWKPNSQGLLV---------------NAIFFNLSWERTFNPEATYPREFR 193
                .|:..:|:.: :.:..:||.:|               |.|.|...|::.|:||.|...||.
Mouse   164 NFAESEEAKKVIND-FVEKGTQGKIVEAVKKLDQDTVFALANYILFKGKWKQPFDPENTEEAEFH 227

  Fly   194 VNATKSVMIPMMHEDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQPDG-LAALQMKLQAMN 257
            |:.:.:|.:|||.............|.:..:|:.:: |:...:.:.||  || :..|:..|....
Mouse   228 VDESTTVKVPMMTLSGMLDVHHCSMLSSWVLLMDYA-GNTTAVFLLPD--DGKMQHLEQTLNKEL 289

  Fly   258 ILSVARNLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTNFRIDGVIHV 322
            |.....|....|..:.||:..|..:..|......:||..||......|.:...|...::...:|.
Mouse   290 ISQFLLNRRRSDAQIHIPRLSISGNYNLKTLMSPLGITRIFNNGADLSGITEENAPLKLSKAVHK 354

  Fly   323 VTFEFQEQGIGTPSTDVGNGSLTHTFNGVKYFLATHPFAFYIID--NTSIYFAGHV 376
            ......|.|....:..|...: |::...:..|  .|||.|.|.:  ..|..|.|.|
Mouse   355 AVLTIDETGTEAAAATVLQVA-TYSMPPIVRF--DHPFLFIIFEEHTQSPIFVGKV 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 82/379 (22%)
Serpina1dNP_033272.1 SERPIN 53..410 CDD:214513 83/381 (22%)
RCL 368..387 3/21 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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