DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and srp-7

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:351 Identity:74/351 - (21%)
Similarity:142/351 - (40%) Gaps:18/351 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGTHLSEYKPKTQKIFA--MSVKKAPVAK 98
            :.::.||...|..::..::|..:.:..:|||:|: .:|:...:.:.....|.|  ::.::....|
 Worm    29 SESLAFSPLSIALALSLVHVAAKGETRDQIREAL-VKGSTDEQLEQHFANISAALLAAERGTEVK 92

  Fly    99 SLTRFYVRQNMKMSTEY--RVFMRHTEGRARNIAFAREQ--LDEVNTFYSHEMGEQIGQVVKESW 159
            .....:.|...|:...|  .|...:..| |.::.|..::  .:.:|.|.....|:.|.:::....
 Worm    93 LANHVFTRAGFKIKQSYLDDVKKLYNAG-ASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDS 156

  Fly   160 WKPNSQGLLVNAIFFNLSWERTFNPEATYPREFRVNATKSVMIPMMHEDSKFAFGILGNLKATAV 224
            ...:...:|.||::|...|:..|..::|:..||..:|.....|..:|. |..:.....|.:...:
 Worm   157 INSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHA-SSVSRDYAENDQFQVL 220

  Fly   225 LVPFSHGDLRMLLIKPDQPDGLAALQMKLQAMNILSVARNLTMMDVFVGIPKFKIHSDLELSPAF 289
            .:|:......:.:..|....||......|.:..|..:..|::...|.|.|||:||.:.|.|..|.
 Worm   221 SLPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEAL 285

  Fly   290 EKMGIKDIFKPSKSFSTLLHRNTNFRIDGVIHVVTFEFQEQG---IGTPSTDVGNGSLTHTFNGV 351
            :.:|||..|........:.   ....:..|.|....|..|:|   ....:..:...|........
 Worm   286 QSLGIKKAFDNDADLGNMA---DGLYVSKVTHKALIEVDEEGTKAAAATTVSISLKSAMFVMEEP 347

  Fly   352 KYFLATHPFAFYII--DNTSIYFAGH 375
            |.|.|.||| |:::  ||..::...|
 Worm   348 KDFTADHPF-FFVLSKDNHPLFVGLH 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 74/351 (21%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 73/349 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

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