DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpini2

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001127881.1 Gene:Serpini2 / 171149 RGDID:619897 Length:405 Species:Rattus norvegicus


Alignment Length:401 Identity:97/401 - (24%)
Similarity:174/401 - (43%) Gaps:40/401 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYVLLLILLG--ISRYRAQKNSQLPDELYAAIVNSFSNR-NIMFSTEMIRSSMLFIYVGVEEDES 62
            ::..||.|.|  .||...|||::...:||.||  |.||: |::||.......:..:.:|.:....
  Rat     6 LWSFLLFLSGSQTSRTMDQKNAEFAVDLYKAI--SLSNKNNVIFSPLGTTVLLGMVQLGAKGKAQ 68

  Fly    63 EQIRKAMHYRGTHLSEYKPKTQKIF-AMSVKKAPVAKSL-TRFYVRQNMKMSTEYRVFMRHT--- 122
            :||.:.:..:.|...|.....:.:| |:|.||.....:| :..|:::...:...|    .|:   
  Rat    69 QQIMQTLRMQKTSTGEEFSVLKSLFSAISKKKQEFTFNLASALYLQEGFIVKESY----LHSNKE 129

  Fly   123 --EGRARNIAF--AREQLDEVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFN 183
              :...:.:.|  |:.....::|:...:...:|..:..|..:.|.::.:|||||:|...|::.|.
  Rat   130 FFQSATKLVDFLDAKTSAQAISTWVESKTDGKIKNMFSEEDFGPLTRLVLVNAIYFKGDWKQKFR 194

  Fly   184 PEATYPREFRVNATKSVMIPMMHEDSKFAFGILGNLKAT--AVLVPFSHGDLRMLLIKPDQPDGL 246
            .|.|...:|......:|.||||....:..:|.......|  .:.:|:...:..::::.|.:...:
  Rat   195 KEDTEMTDFSKKDGSTVKIPMMKALLRAKYGYFSESSMTYQVLELPYKADEFSLVILLPTEDVNI 259

  Fly   247 AALQMKLQAMNILSVARNLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRN 311
            ..::.::.|.::......|...:|.|.:|:|||...|:...|...:.:.:||......|.:.. :
  Rat   260 EEVEKQVTARHVQKWFSELHEEEVEVSLPRFKIEQKLDFKEALFSLNVTEIFSGGCDLSGITD-S 323

  Fly   312 TNFRIDGVIHVVTFEFQEQ--------GIGTPSTDVGNGSLTHTFNGVKYFLATHPFAFYI--ID 366
            :...:...:..|.||..|.        ||..|:.    .|||.|     .|||.|||.|.:  |.
  Rat   324 SELYVSRAMQKVFFEINEDGSEAAASTGINIPAI----MSLTQT-----QFLANHPFLFIMKHIQ 379

  Fly   367 NTSIYFAGHVT 377
            ..||.|.|.||
  Rat   380 TESILFMGKVT 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 86/372 (23%)
Serpini2NP_001127881.1 SERPIN 23..405 CDD:294093 91/384 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.030

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