DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn53F and Serpina3c

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:390 Identity:82/390 - (21%)
Similarity:156/390 - (40%) Gaps:69/390 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AQKNSQLPDELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAMHYRGT------ 74
            |..|:.....||..:.....:.||:||...|.:::..:.:|.:.:..|:|.:.:::..|      
Mouse    67 ASINTDFAFSLYKKLALKNPDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTETPEAD 131

  Fly    75 ------HLSEYKPKTQKIFAMSVKKAPVAKSLTRFYVRQNMKMSTEYRVFMR---HTEGRARNIA 130
                  ||.:......:...:|...|        .:|.:::::..|::...|   ..|....:..
Mouse   132 IHQGFGHLLQRLSHPGEQVQISTGSA--------LFVEKHLQILAEFQEKARALYQAEAFTADFQ 188

  Fly   131 FAREQLDEVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATYPREFRVN 195
            ...|....:|.:.|::...:|..::.:  ...::..:|||.|:|...|:..|||..|:..||.::
Mouse   189 QPLEATKLINDYVSNQTQRKIKGLISD--LDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLD 251

  Fly   196 ATKSVMIPMM---------HEDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQPDGLAALQM 251
            ..:||.:|||         ..|.:        |..|.|.:.:. |:...|.|.||| ..:..::.
Mouse   252 VKRSVKVPMMKIKTLTTPYFRDEE--------LSCTVVELKYK-GNASALFILPDQ-GRMQQVEA 306

  Fly   252 KLQAMNILSVARNL---TMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTN 313
            .||...:.....:|   .|.:::  :|||.|.:|..|.....::|||:||......|.:. ...:
Mouse   307 SLQPETLRKWKNSLRPRKMGELY--LPKFSISTDYSLKNILPELGIKEIFSKQADLSGIT-GTKD 368

  Fly   314 FRIDGVIHVVTFEFQEQGI-GTPSTDVG------------NGS----LTHTFNGVKYFLA--THP 359
            ..:..::|....:..|.|. |..:|.|.            |.:    ::||......|:|  |||
Mouse   369 LIVSQMVHKAVLDVAETGTEGVAATGVNFRILSRRTSLWFNRTFLMVISHTDVQTTLFIAKITHP 433

  Fly   360  359
            Mouse   434  433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 80/381 (21%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 82/390 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.