DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn53F and Serpind1

DIOPT Version :10

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_032249.3 Gene:Serpind1 / 15160 MGIID:96051 Length:478 Species:Mus musculus


Alignment Length:400 Identity:86/400 - (21%)
Similarity:171/400 - (42%) Gaps:42/400 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLLILLGISRYRAQK--NSQLPDELYAAIVN-SFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQI 65
            :|.:..|.||.:...  |::....||..:.: :.::.|:..:...|.::|..|.:|:..:..|::
Mouse    92 ILQLFQGKSRIQRLNILNAKFAFNLYRVLKDQATTSDNLFIAPVGISTAMGMISLGLRGETHEEV 156

  Fly    66 RKAMHYRG-----------THLSEYKPKTQKIFAMSVKKAPVAKSLTRFYVRQNMKMSTEYRVFM 119
            ...:|:|.           |..:.::..|.::|..:.  ....:|:...|:::...:..:::..|
Mouse   157 HSVLHFRDFVNASSKYEVTTIHNLFRKLTHRLFRRNF--GYTLRSVNGLYIQKQFPIREDFKAAM 219

  Fly   120 RH---TEGRARNI---AFAREQLDEVNTFYSHEMGEQIGQVVKESWWK--PNSQGLLVNAIFFNL 176
            |.   .|.:..|.   ||    :.:.|   :|.:....| ::||:...  |.:|.|::|.|:|..
Mouse   220 REFYFAEAQEANFPDPAF----ISKAN---NHILKLTKG-LIKEALENIDPATQMLILNCIYFKG 276

  Fly   177 SWERTFNPEATYPREFRVNATKSVMIPMMHEDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKPD 241
            :|...|..|.|:...||:|..:.|.:.||.....|.......|....:.:.:. |.:.||::.|.
Mouse   277 TWVNKFPVEMTHNHNFRLNEREVVKVSMMQTKGNFLAANDQELDCDILQLEYV-GGISMLIVVPR 340

  Fly   242 QPDGLAALQMKLQAMNILSVARNLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFST 306
            :..|:..|:.:|....:....:::|.....|.:||||:..:..|....:.|||..:|..:.:.|.
Mouse   341 KLSGMKTLEAQLTPQVVERWQKSMTNRTREVLLPKFKLEKNYNLVEVLKSMGITKLFNKNGNMSG 405

  Fly   307 LLHRNTNFRIDGVIHVVTFEFQEQGIGTPS-TDVGNGSLTHTFNGVKYFLATHPFAFYIIDN--T 368
            :  .:....||...|..|....|:|....: |.||...|:....    |....||.|.:.::  :
Mouse   406 I--SDQRIAIDLFKHQSTITVNEEGTQAAAVTTVGFMPLSTQVR----FTVDRPFLFLVYEHRTS 464

  Fly   369 SIYFAGHVTS 378
            .:.|.|.||:
Mouse   465 CLLFMGKVTN 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 serpin42Dd-like_insects 20..379 CDD:381070 81/381 (21%)
Serpind1NP_032249.3 serpinD1_HCF2 32..478 CDD:381004 86/399 (22%)
2 X 11 AA approximate repeats, Asp/Glu-rich (acidic) (hirudin-like) 54..78
Glycosaminoglycan-binding site. /evidence=ECO:0000250 171..191 3/19 (16%)
Blue background indicates that the domain is not in the aligned region.

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