DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn53F and serpinh1

DIOPT Version :9

Sequence 1:NP_001036553.1 Gene:Spn53F / 36931 FlyBaseID:FBgn0034195 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_002937290.2 Gene:serpinh1 / 100490491 XenbaseID:XB-GENE-1005105 Length:450 Species:Xenopus tropicalis


Alignment Length:386 Identity:84/386 - (21%)
Similarity:150/386 - (38%) Gaps:48/386 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AQKNSQLPDELYAAIVNSFSNRNIMFSTEMIRSSMLFIYVGVEEDESEQIRKAM-------HYRG 73
            |.|::.|...||..:....:..||:.|..::.||:..:.:|.:...:.|.:..:       .:..
 Frog    76 ADKSAGLAFNLYQTMAKDKNVENILLSPVVVASSLGLVSLGGQASTAAQAKAVLSADKLSDEHIH 140

  Fly    74 THLSEYKPKTQKIFAMSVK-------KAPVAKSLTRFYVRQNMKMSTEYRVFMRHTEGRARNIAF 131
            :.|:|...:.....|.:|.       ..|.:.|.|..:|: |.|....|    .|::...|:   
 Frog   141 SGLAELLNEVSNSTARNVTWKIGNRLYGPSSISFTDDFVK-NSKKHYNY----EHSKINFRD--- 197

  Fly   132 AREQLDEVNTFYSHEMGEQIGQVVKESWWKPNSQGLLVNAIFFNLSWERTFNPEATYPREFRVNA 196
            .|..|..:|.:.|.....::.:|..:  .:.....|:|||:||...|:..|:.:....|.|.|..
 Frog   198 KRSTLRSINEWASQATDGKLPEVTSD--MERTDGALIVNAMFFKPHWDERFHHQMVDNRGFMVTR 260

  Fly   197 TKSVMIPMMH--------EDSKFAFGILGNLKATAVLVPFSHGDLRMLLIKPDQPDGLAALQMKL 253
            :.:|.:||||        ||.|....||.        :|.:|....||.|.|...:.|..::..|
 Frog   261 SFTVSVPMMHRTGLYNYLEDEKNGLQILE--------MPLAHKLSSMLFIMPHHVEPLERVEKLL 317

  Fly   254 QAMNILSVARNLTMMDVFVGIPKFKIHSDLELSPAFEKMGIKDIFKPSKSFSTLLHRNTNFRIDG 318
            ....:.:....:|...|.|.:||..:....:|......:|:.:....:|:..:.:....:..:..
 Frog   318 TREQVKTWVGKMTKKAVAVSLPKVSLEVSHDLQKHLGDLGLTEAIDKTKADLSKISGKKDLYLAS 382

  Fly   319 VIHVVTFEFQEQGIGTP-STDVGNGSLTHTFNGVKYFLATHPFAFYIID--NTSIYFAGHV 376
            :.|....|:...  |.| .:|:.:   .......|.|...|||.|.|.|  ..||.|.|.:
 Frog   383 MFHAAALEWDTD--GNPFDSDIYS---REELRAPKLFYVDHPFVFLIKDEKTDSILFIGRL 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn53FNP_001036553.1 SERPIN 25..376 CDD:238101 81/375 (22%)
serpinh1XP_002937290.2 serpinH1_CBP1 68..449 CDD:381003 84/386 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.