DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15611 and Plekhg4

DIOPT Version :10

Sequence 1:NP_611189.2 Gene:CG15611 / 36930 FlyBaseID:FBgn0034194 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_038954139.1 Gene:Plekhg4 / 307796 RGDID:1310790 Length:1231 Species:Rattus norvegicus


Alignment Length:463 Identity:101/463 - (21%)
Similarity:173/463 - (37%) Gaps:112/463 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LESQSPSS---------PIATTLPKSQASSNGKLEKQISLLDSDSGISLSSINTCSTTAANSSPT 115
            |:.||.:|         |...|:|        .|.|..| .|.:.|..|...:.....||..:..
  Rat   663 LKPQSMNSTATLYVRRAPAIPTIP--------PLRKSYS-FDQNLGKHLGDASNRGHCAATVTDC 718

  Fly   116 YR--APNGF--HSFPSHTLSFETLGDEYHEDEDTLSLENLFPCDQTEIYASKKISFIIDELIQTE 176
            :|  |..|.  .|.||..||                       ..::..:..::..::.|::.||
  Rat   719 HRPEARGGIRPRSSPSVPLS-----------------------GSSDFRSPNRLQLVLAEMVATE 760

  Fly   177 VNYVNNLKKGMLNYGQLKDVEDLPEALSGETKQKMLLGNIKEILELHEKEILPLMLRNQRDLKGL 241
            ..||..|...:.||....|..|:|:.|.|:  :..|.||::::.:.|....|..:....|....:
  Rat   761 REYVRALDYTIQNYFPELDRSDVPQGLRGQ--RAHLFGNLEKLRDFHFHFFLRELEACTRHPPRV 823

  Fly   242 FDEFAAHFEKNSFYCYVSFTMGKKSSMQLRQD-NRLWLQTYQTQIKDKLGIDSFLVQPIQRLTRY 305
            ...|..|  :..|..|..::..|..|..|..: ...:.:..|..:.|.|.:.|:|::||||:::|
  Rat   824 AHAFLRH--RVQFGMYALYSKNKPRSDALMSNYGHTFFKEKQQALGDHLDLASYLLKPIQRMSKY 886

  Fly   306 PLLLQQFISEFYKSGISCKPVLTAVCKLETRMRRALDVVNQAEEIPNIE-----ELNELDVLQ-- 363
            .||||:               |...|   ....:.|..:..|:.:.:.:     :|..:|.:|  
  Rat   887 ALLLQE---------------LARAC---GGPAQELGALQAAQSLVHFQLRHGNDLLAMDAIQGC 933

  Fly   364 ------LGNFRRATEFD--AQHFPTRKKYRSKVFLFDRCLVCTEVRK-----KRLAYRQHYNWEH 415
                  .|...|..||.  |.|   .|..| :||||:..|:.::.|:     ....|::.:....
  Rat   934 DVNLKEQGQLVRQDEFTVRAGH---HKSCR-RVFLFEELLLFSKPRRGPAGVDIFTYKRSFKMAD 994

  Fly   416 VEL------QRPLDSVSSNANKIINLLVKQEEGGSSVGSKREEYSFMAAEASVVK-QWLQATH-- 471
            :.|      .:....:.....|..:|.|.|   .|.|.:|:      |..|.:.: .|.||.|  
  Rat   995 LGLTECCGESKLRFEIWFRRRKARDLFVLQ---ASDVATKQ------AWTADISRLLWRQAVHNK 1050

  Fly   472 --KIIEIA 477
              ::.|:|
  Rat  1051 EVRMAEMA 1058

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15611NP_611189.2 RhoGEF 167..313 CDD:470622 40/146 (27%)
Plekhg4XP_038954139.1 DUF3584 <376..>596 CDD:432349
RhoGEF 749..915 CDD:238091 44/187 (24%)
PH_puratrophin-1 915..1050 CDD:270062 32/147 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.