DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30456 and ROM1

DIOPT Version :9

Sequence 1:NP_611188.3 Gene:CG30456 / 36929 FlyBaseID:FBgn0050456 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_011584.2 Gene:ROM1 / 852961 SGDID:S000003302 Length:1155 Species:Saccharomyces cerevisiae


Alignment Length:887 Identity:172/887 - (19%)
Similarity:311/887 - (35%) Gaps:296/887 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ERNLSNRNFNKRNSRRRISHQAAEQERHSSTLVSSNLE----SNDVARPVSSVSSSSSSIQLSYS 74
            |.:|.|:.|.:...::|.|..:...:..|.:.|.:|:.    :||.... |:...:.:|:: .|:
Yeast     5 ELDLRNKYFYEIFGKKRKSDTSTPTQLFSGSKVQTNINEISITNDEDED-STEDENKASLK-DYT 67

  Fly    75 VNSDTDSSYRHRSLLKMHE--AESVGGLGT--ESTPES----PMSPQTPDPALLD-VRQKVHRFE 130
            :..||.:.||.......|:  |..|..:.|  .|:|:|    .:||.....::.| .||.     
Yeast    68 LGHDTGARYRIAPDCSSHQLKASPVLHISTNLNSSPQSFTGDQISPTNKKISINDSTRQD----- 127

  Fly   131 AFRTNICFI----KQERHSLKLLENRRHP-----SFEDQSEDHHTPP---ATPP--------RRI 175
              :.|.|..    .|:|.::.|...|:|.     ||...|..|...|   :|||        ..:
Yeast   128 --KGNSCTTTSSPSQKRSNVLLPHVRKHSSPSLLSFSKNSGSHMGDPNQLSTPPTPKSAGHTMEL 190

  Fly   176 RLPGLGSRGSSRSSSIPSF-------------------------QAGIHEVRSEDEVDQISDFE- 214
            .....|...||.:||:.:.                         |...|..||:.....:::.. 
Yeast   191 HSSFNGKHSSSSTSSLFALESLKTQNRRSSNSSNHSSQYRRHTNQHQRHHSRSKSSPVSLTEISM 255

  Fly   215 -----------------------------------TDSHTAAEEYLVVDTTSEVVPSEE------ 238
                                               .||.|..:   .:||...::.|.:      
Yeast   256 IKGTPLVYPALLSLIAIKFKQTIKLSTHKKMGLLYRDSFTGKQ---AIDTLCLIIGSLDRNLGML 317

  Fly   239 -------------------VADSKVDQQQV--QRSISADQSKEALTLPLKMRNDFPRNYRS--TP 280
                               |.||.::..::  :....|.||:.:.::    .|.|..:..|  :.
Yeast   318 IGKSLEAQKLFHDVLYDHGVRDSVLEIYELSSESIFMAHQSQSSTSI----ANTFSSSSSSVNSL 378

  Fly   281 RRKTEIIGT------------------------------TNEHLV---GKFHSVYQPKDEEEEVE 312
            |.||||.|.                              .|.||.   |...::....|:|::..
Yeast   379 RTKTEIYGVFVPLTHCYSSTCSLEKLCYSISCPNRLQQQANLHLKLGGGLKRNISLALDKEDDER 443

  Fly   313 IELRDKSDKCV-HPILEELIKTEEAYVNNLFT-------GIENYGNIFQRKDL-----PLGLRGK 364
            |...:...|.| ..:.::.||.:|| :..|||       .:|...:.|.:|.|     |..:|..
Yeast   444 ISWTNSVPKSVWESLSKQQIKRQEA-IYELFTTEKKFVKSLEIIRDTFMKKLLETNIIPSDVRIN 507

  Fly   365 --KYDLFGNIEQIAEFHRDEFLPMLQRNRRDLKRL--------------FDEFLQFLDQHCFYGY 413
              |: :|.:|.:|...:| |||..|.: |:.|..:              ||.||.::....:..|
Yeast   508 FVKH-VFAHINEIYSVNR-EFLKALAQ-RQSLSPICPGIADIFLQYLPFFDPFLSYIASRPYAKY 569

  Fly   414 VIFTMNKQKSL-----KLCDLYKNYFTSIRLERDDKLGINSFLVQPIQRMARYPLLLTQFIN--- 470
            :|.|   |:|:     :..|...|  :|:|      .||:|||.|.:.|..||.||:.:.|:   
Yeast   570 LIET---QRSVNPNFARFDDEVSN--SSLR------HGIDSFLSQGVSRPGRYSLLVREIIHFSD 623

  Fly   471 ---------TFFKNRDIVMKPLIESCCRLEKRLRALLTTTNESEIINDIVDCHEF-NVYYQGKFR 525
                     ...|.:|: :|.|::   |:::...|.....:...:...|:..:|: |:....:.|
Yeast   624 PVTDKDDLQMLMKVQDL-LKDLMK---RIDRASGAAQDRYDVKVLKQKILFKNEYVNLGLNNEKR 684

  Fly   526 KVNEFQVLD----HKLKRSYRSKV--FIFDKCIIYTEIKGKN---------------LLF----- 564
            |:....:|.    :|...|:...:  ::.|..:::.:.|..|               |||     
Yeast   685 KIKHEGLLSRKDVNKTDASFSGDIQFYLLDNMLLFLKSKAVNKWHQHTVFQRPIPLPLLFICPAE 749

  Fly   565 ----HGRYPCEHIGISA-------KTKS------FTLYYERRKQQECEFTADPVQIAIWLDLIRD 612
                ..||..|:...||       :|.:      |..|..:::.|...:...|..:...::.:: 
Yeast   750 DMPPIKRYVTENPNCSAGVLLPQYQTSNPKNAIVFAYYGTKQQYQVTLYAPQPAGLQTLIEKVK- 813

  Fly   613 MINNYANEERQKLQERYSRENDHLHRK---APSFSLYRDSNR 651
                   :|:::|.:    |..|:..|   ...|..|.::||
Yeast   814 -------QEQKRLLD----ETKHITFKQMVGQFFHSYINTNR 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30456NP_611188.3 RhoGEF 326..470 CDD:279015 48/176 (27%)
ROM1NP_011584.2 ROM1 1..1155 CDD:227709 172/887 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

Return to query results.
Submit another query.