DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG46491 and plekhg4

DIOPT Version :10

Sequence 1:NP_611188.3 Gene:CG46491 / 36929 FlyBaseID:FBgn0287631 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001128280.3 Gene:plekhg4 / 779571 XenbaseID:XB-GENE-5998210 Length:1921 Species:Xenopus tropicalis


Alignment Length:706 Identity:157/706 - (22%)
Similarity:286/706 - (40%) Gaps:159/706 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RRRISHQAAEQERHSSTLVSSNLESNDVARPVSSVSSSSSSIQLSYS--------VNSDTDSSYR 84
            |.:|.|....:|:.        :|..::|..: .:..::...:.::|        :....:::.|
 Frog  1139 RYKIQHPEISEEKF--------MEMKELACEL-KIEKATKQWKFAWSKCQEARHVLEKKLEAALR 1194

  Fly    85 HRSLLKMHEAESVGGLGTESTPESPMSPQTPDPALLDVRQKVHRFEAFRTNICFIKQERHSLKLL 149
            .:|:|.          |.:|:|......:..:  ||:..:..:.|::...|.....:||...::|
 Frog  1195 AKSMLS----------GEQSSPREADGMEQKE--LLESNRNKYFFQSKPYNSPLCPRERRLGRVL 1247

  Fly   150 ENRRHPSFEDQSEDHHTPPATPPRRIRLPGLGSRGSSRSSSIPSFQAGIHEVRSEDEVDQISDFE 214
            .||  |.. ..::||.|..|:|        ....||:.:|...:.:..:..:..||         
 Frog  1248 CNR--PEI-GNTDDHTTRKASP--------TSDAGSTVTSVFRTRKMSLQSISGED--------- 1292

  Fly   215 TDSHTAAEEYLVVDTTSEVVPSEEVADSKVDQQQVQRSISADQSKEALTLPLKMRNDFP------ 273
                      |.:|.. .:.||.....:...:...:|.:...||   ..||   .::.|      
 Frog  1293 ----------LSLDLL-HIAPSGSSTPTVTPRPFTRRLLRKAQS---FDLP---GSEGPGYGCQR 1340

  Fly   274 RNYRSTPRRKTEI----IGTTNEHLVGKFHSVYQPKDEEEEV----------EIELRDKSDKCVH 324
            |....|.|..|.:    :..::..||.:..|..|.:|...|.          ..:.|.:|.|..|
 Frog  1341 RLSEPTRRGNTGVFIKGLEVSSTELVDRPCSPRQTRDWSAECMYSERRCSVSSSDGRSRSSKLRH 1405

  Fly   325 PILEELIKTEEAYVNNLFTGIENYGNIFQRKDLPLGLRGKKYDLFGNIEQIAEFHRDEFLPMLQR 389
             |::|::.||..||.:|:...|||....:|.|||..||||:..:|||:|::.:||...||..|:.
 Frog  1406 -IIDEMVTTEREYVRSLWYISENYFPEMERVDLPQDLRGKRGIIFGNLEKLRDFHSQYFLKELES 1469

  Fly   390 NRRDLKRLFDEFLQFLDQHCFYGYVIFTMNKQKSLKLCDLYKN-YFTSIRLERDDKLGINSFLVQ 453
            ......|:...||:..||  |..|.:::.||.:|..|...:.| :|.:.:....||:.:.|:|::
 Frog  1470 CCNHPLRVSHCFLRHKDQ--FGMYALYSKNKPRSDALLGSHGNIFFKNKQFLLGDKMDLASYLLK 1532

  Fly   454 PIQRMARYPLLLTQFINTFFKNRDIVMKPLIESCCRLEKRLRALLTTTNESEII-----NDIV-- 511
            |||||::|.|||               |.||:.|...:::..|.|....|....     ||::  
 Frog  1533 PIQRMSKYALLL---------------KDLIKECEEAQEQELAYLRAAEEMVKFQLRHGNDLLAM 1582

  Fly   512 ----DCHEFNVYYQGKFRKVNEFQV-LDHKLKRSYRSKVFIFDKCIIYTEIK----GKNLLFHGR 567
                || :.|:..||:..:.:||.| |..|   ..:..||:|:..|::::.|    |.::..:.|
 Frog  1583 DAIRDC-DVNLKEQGQLVRQDEFTVWLGRK---KCQRHVFLFEDLILFSKPKRIEGGLDVYIYKR 1643

  Fly   568 -YPCEHIGISAKTKS----FTLYYERRKQQECEF--TADPVQIAIWLDLIRDMINNYANEERQ-K 624
             :....||::..:..    |.:::.|||..:...  .::|.....|...|..::...|...:: :
 Frog  1644 SFKTADIGLTENSGDSGLRFEIWFRRRKSSDTHILQASNPETKHAWTSDIAKILWQQATRNKEIR 1708

  Fly   625 LQERYSRENDHLHRKAPSFSLYRDSNRFSSDSGIGN-IWIMPKADEDTISNRTTWY 679
            :||..|                         .|:|| .::..|..:..|:||...|
 Frog  1709 MQEMVS-------------------------MGVGNKPFLDIKPSDAAINNRAVDY 1739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG46491NP_611188.3 RhoGEF 326..469 CDD:459876 53/143 (37%)
ROM1 <438..>660 CDD:227709 53/245 (22%)
plekhg4NP_001128280.3 SEC14 726..857 CDD:469559
SPEC 989..1193 CDD:413338 7/62 (11%)
RhoGEF 1406..1568 CDD:459876 59/178 (33%)
PH_puratrophin-1 1570..1705 CDD:270062 29/138 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.