DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30456 and plekhg4

DIOPT Version :9

Sequence 1:NP_611188.3 Gene:CG30456 / 36929 FlyBaseID:FBgn0050456 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_009301619.1 Gene:plekhg4 / 326099 ZFINID:ZDB-GENE-030131-4824 Length:2630 Species:Danio rerio


Alignment Length:719 Identity:161/719 - (22%)
Similarity:269/719 - (37%) Gaps:212/719 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LPFRRERNLSNRNFNKRNSRRRISHQAAEQERHSSTLVSSNLESNDVARPVSSVSSSSSSIQLSY 73
            :..|..|:..:::....:|||........|||.||                           :|:
Zfish  1907 MALRSRRDSDSKSVRSDSSRRNSDVSTKHQERSSS---------------------------ISF 1944

  Fly    74 SVNSDTDSSYRHRSLLKMHEAESVGGLGTESTPESPMSPQTPDPALLDVRQKVHRFEAFRTNICF 138
            |.......:: .|..|..|.:       |.|||.||...:      ||.|..|            
Zfish  1945 SCRKAFGGAW-GRDRLSSHSS-------TSSTPSSPSGIR------LDARDTV------------ 1983

  Fly   139 IKQERHSLKLLENRRHPSFEDQSEDHHTPPATPPRRIRL---------------PGLGSRGSSRS 188
                          |.|:....|.:|..|.:||.|..||               .||.|...| .
Zfish  1984 --------------RTPTGSPYSIEHRIPHSTPVRSHRLTRSISTDESPQSPHAEGLASTSPS-G 2033

  Fly   189 SSIPSFQAGIHEVRSEDEV--DQISDFETDSHTAAEEYLVVDTTSEVVPSEEVADSKVDQQQVQR 251
            :|:.:.:..:.:.:|.|..  :.:|.:.|...|.:|. .....|...:...||:.::|       
Zfish  2034 TSVQTNRRVLRKTQSFDTAGSEPVSQYGTCQRTLSEP-ARRGNTGVFIKGLEVSSTEV------- 2090

  Fly   252 SISADQSKEALTLPLKMRNDFPRNYRSTPRRKTEIIGTTNEHLVGKFHSVYQPKDEEEEVEIELR 316
                              .|.|.:.|..|......|..         |....|..       |.|
Zfish  2091 ------------------IDRPYSPRLPPIHGWSSIDA---------HRSGSPAP-------ETR 2121

  Fly   317 DKSDKCVHPILEELIKTEEAYVNNLFTGIENYGNIFQRKDLPLGLRGKKYDLFGNIEQIAEFHRD 381
            .|..|..| |::|::.||..||.:|...|:||....:|..||..||||:..:|||:|::.:||..
Zfish  2122 SKGSKLRH-IVDEMVTTEREYVRSLRYIIDNYFPEMERAVLPQDLRGKRSVIFGNLEKLVDFHSQ 2185

  Fly   382 EFLPMLQRNRRDLKRLFDEFLQFLDQHCFYGYVIFTMNKQKSLKLCDLY-KNYFTSIRLERDDKL 445
            .||..|:.......|:...||:..||  |..|.:::.||.||..|...: .|:|...::|..||:
Zfish  2186 YFLKELESCCNHPLRVSHCFLRHQDQ--FSLYALYSKNKPKSDTLLASHGNNFFKHKQMELGDKM 2248

  Fly   446 GINSFLVQPIQRMARYPLLLTQFINTFFKNRDIVMKPLIESCCRLEKR----LRAL-------LT 499
            .:.|:|::|||||::|.|||               |.||:....::::    |||.       |.
Zfish  2249 DLASYLLKPIQRMSKYALLL---------------KDLIKEVSEVQEQELTYLRAAAEMVKFQLR 2298

  Fly   500 TTNESEIINDIVDCHEFNVYYQGKFRKVNEFQVLDHKLKRSYRSK-----VFIFDKCIIYTEIK- 558
            ..|:...::.|.|| :.|:..||:..:.:||.:       ||..|     ||:|:..:::::.| 
Zfish  2299 HGNDLLAMDAIRDC-DVNLKEQGQLVRQDEFTI-------SYGRKKCQRHVFLFEDLVLFSKPKR 2355

  Fly   559 ---GKNL-LFHGRYPCEHIGIS----AKTKSFTLYYERRKQQECEF-----TADPVQIAIWLDLI 610
               |.:: ::...:....:|::    ..:..|.:::.||..:...:     ||| ::.|...|:.
Zfish  2356 IEGGLDVYIYKHSFKTADVGMTETSGENSLRFEIWFRRRTSKNQTYILQSSTAD-IKHAWTCDIA 2419

  Fly   611 RDMINNYANEERQKLQERYS--------------------RENDHL-------HRKAPSFSLYRD 648
            |.:.......:..::||..|                    |..|::       .|.:.:.||:..
Zfish  2420 RILWQQATRNKEIRMQEMVSMGVGNKPFLDIKPSDAAINDRAIDYIMKGRGARTRASIAVSLFDH 2484

  Fly   649 SNRF 652
            ||.|
Zfish  2485 SNPF 2488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30456NP_611188.3 RhoGEF 326..470 CDD:279015 54/144 (38%)
plekhg4XP_009301619.1 COG5099 467..>912 CDD:227430
SEC14 1433..1573 CDD:238099
BAR <1707..>1807 CDD:299863
RhoGEF 2130..2302 CDD:279015 61/188 (32%)
PH_puratrophin-1 2294..2430 CDD:270062 28/144 (19%)
PH 2319..2414 CDD:278594 19/102 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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