DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30456 and Arhgef40

DIOPT Version :9

Sequence 1:NP_611188.3 Gene:CG30456 / 36929 FlyBaseID:FBgn0050456 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_006519104.1 Gene:Arhgef40 / 268739 MGIID:2685515 Length:1524 Species:Mus musculus


Alignment Length:741 Identity:152/741 - (20%)
Similarity:263/741 - (35%) Gaps:194/741 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RNSRRRISHQAAEQERHSSTLVSSNLE--SNDVARPVSSVSSSSSSIQLSYSVNSDTDSSYR--- 84
            |.|..|:..|   :||.....|...|:  |......::|.|...:|:    ||..:|:..:|   
Mouse   769 RLSNLRVQQQ---EERQRLRQVQQVLQWLSGPGEEQLASFSMPGNSL----SVLQETELRFRAFS 826

  Fly    85 ---HRSLLKMHEAESVGGLGTESTPESPMSPQTPDPALLDV-RQKVHRFE-----AFRTNICFIK 140
               ...|::..||.::         |..::.|    .:||: .|::.:.|     |.|....|  
Mouse   827 TEVQERLVQAREALAL---------EEDLTSQ----KVLDIFEQRLEQAESGLHRALRLQRFF-- 876

  Fly   141 QERHS-------------------LKLLENRRHP-----SFEDQ---SEDHHTPPATP------- 171
            |:.|.                   |..|..||.|     :|::.   :.|..:|.|..       
Mouse   877 QQAHEWVDEGSARLAGAGSGREALLAALALRRAPEPSAGTFQEMRALALDLGSPAALREWGRCRA 941

  Fly   172 -----PRRIRLPGLGSRGSSRSSSIPSFQAGIHEVRSEDEVDQISDFETDSHTAAEEYLVVDTTS 231
                 .|||: ..||...|.||          |..|..|.... :..:..:|:.:.     ..:|
Mouse   942 RCQELERRIQ-QQLGEEASPRS----------HRRRRADSASS-AGAQHGAHSPSP-----SLSS 989

  Fly   232 EVVPSE---EVADSKVDQQQVQRSISADQSKEALTLPLKMRNDFPRN--YRSTPRRKTEIIGTT- 290
            .::||.   ..|.|...    ......|..:|.|.|..:.....||.  .|......||::..| 
Mouse   990 LLLPSSPGPRAAPSHCS----LTPCGEDYEEEGLELAPETDGRPPRAVLIRGLEVTSTEVVDRTC 1050

  Fly   291 --NEH-LVGKF------HSVYQPKDEEEEVEIELRDKSDKCVHPILEELIKTEEAYVNNLFTGIE 346
              .|| |:|:.      ..:..|:.|        |.:|......::.|||..|:.||..|...:.
Mouse  1051 SPREHVLLGRAGGPDGPWGIGTPRME--------RKRSISAQQRLVSELIACEQEYVTTLNEPVP 1107

  Fly   347 NYGNIFQRKDLPLGLRGKKYDLFGNIEQIAEFHRDEFLPMLQRNRRDLKRLFDEFLQFLDQHCFY 411
            ..|     .:|...||..........|::..||...||..||.......|:...||:..||...|
Mouse  1108 LPG-----PELTPELRCTWAAALSVRERLRSFHGTHFLQELQGCAAHPLRIGACFLRHGDQFNLY 1167

  Fly   412 GYVIFTMNKQKSLKLCDLYKNYFTSIRLERDDKLGINSFLVQPIQRMARYPLLLTQFINTFFKNR 476
            ...:...:|.:| .|..|    ..|::...:....:...|.||::::|||..||.:.:..     
Mouse  1168 AQFVKHRHKLES-GLAAL----TPSVKGSMESSPCLPRALQQPLEQLARYGQLLEELLRE----- 1222

  Fly   477 DIVMKPLIESCCRLEKR-LRALLTTTNESE-------IINDIVDCHEFNVYYQGKFRKVNEFQVL 533
               ..|.:.|    |:: |||.:....|.|       .:..:..| |.::..||:....:.|.|:
Mouse  1223 ---AGPELSS----ERQALRAAVQLLQEQEARGRDLLAVEAVRGC-EIDLKEQGQLLHRDPFTVI 1279

  Fly   534 DHKLKRSYRSKVFIFDKCIIYTEIKG-----KNLLFHGRYPCEHIGISAKTKS----FTLYYERR 589
            ..: |:..| .||:|:..::::::||     :..::...:....:|::.....    |.|::.||
Mouse  1280 CGR-KKCLR-HVFLFEDLLLFSKLKGSEGGSETFVYKQAFKTADMGLTENIGDSGLCFELWFRRR 1342

  Fly   590 KQQEC---EFTADPVQIAIWLDLIRDMI-NNYANEERQKLQERYSRENDHLHRKAPSFSLYRDSN 650
            :.:|.   :.|:...::. |...|..:: ...|:.:..::|:..|                    
Mouse  1343 RAREAYTLQATSPETKLK-WTSSIAQLLWRQAAHNKELRVQQMVS-------------------- 1386

  Fly   651 RFSSDSGIGNIWIMPKADEDTISNRT 676
                 .||||   .|..|...:..||
Mouse  1387 -----MGIGN---KPFLDIKALGERT 1404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30456NP_611188.3 RhoGEF 326..470 CDD:279015 37/143 (26%)
Arhgef40XP_006519104.1 RecN <755..>874 CDD:223571 27/124 (22%)
RhoGEF 1084..1243 CDD:383033 43/180 (24%)
PH_puratrophin-1 1242..1377 CDD:270062 25/138 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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