back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment GstS1 and Gsta3

DIOPT Version :9

Sequence 1:	NP_001261040.1	Gene:	GstS1 / 36927	FlyBaseID:	FBgn0010226	Length:	250	Species:	Drosophila melanogaster
Sequence 2:	NP_001009920.1	Gene:	Gsta3 / 494500	RGDID:	1591980	Length:	221	Species:	Rattus norvegicus

Alignment Length:	208	Identity:	51/208 - (24%)
Similarity:	102/208 - (49%)	Gaps:	16/208 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly    42 PAEPIKHSYTLFYFNVKALAEPLRYLFAYGNQEYED-VRVTRDEWPALKP--TMPMGQMPVLEVD 103
            |.:|:.|     ||:.:...||:|:|.|....|:|: ...|||:...|:.  ::...|:|::|:|
  Rat     2 PGKPVLH-----YFDGRGRMEPIRWLLAAAGVEFEENFLKTRDDLARLRSDGSLMFEQVPMVEID 61

  Fly   104 GKRVHQSISMARFLAKTVGLCGATPWEDLQIDIVVDTINDFRLSSEQFVSYEPEDEIKEKKLVTL 168
            |.::.|:.::..::|....|.|....|...||:..:.:.|..| ...:..|.|..| ||..|..:
  Rat    62 GMKLVQTKAILNYIATKYNLYGKDMKERALIDMYAEGVADLEL-MVLYYPYMPPGE-KEASLAKI 124

  Fly   169 NAEVIPFYLEKLEQTVKDN-DGHLALGKLTWADVYFAGITDYMNYMVKRD--LLEPYPALRGVVD 230
            ..:....|....|:.:|.: ..:|...||:.|||   .:.:.:.::.:.|  :::.:|.|:.:..
  Rat   125 KDKARNRYFPAYEKVLKSHGQDYLVGNKLSRADV---SLVELLYHVEEMDPGIVDNFPLLKALRT 186

  Fly   231 AVNALEPIKAWIE 243
            .|:.|..:|.:::
  Rat   187 RVSNLPTVKKFLQ 199

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.