back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment GstS1 and Gsta4

DIOPT Version :9

Sequence 1:	NP_001261040.1	Gene:	GstS1 / 36927	FlyBaseID:	FBgn0010226	Length:	250	Species:	Drosophila melanogaster
Sequence 2:	NP_001100310.1	Gene:	Gsta4 / 300850	RGDID:	1309970	Length:	222	Species:	Rattus norvegicus

Alignment Length:	196	Identity:	48/196 - (24%)
Similarity:	92/196 - (46%)	Gaps:	7/196 - (3%)

- Green bases have known domain annotations that are detailed below.

  Fly    52 LFYFNVKALAEPLRYLFAYGNQEYEDVRV-TRDEWPALKP--TMPMGQMPVLEVDGKRVHQSISM 113
            |:||..:...|.:|:|.|....|:|:..: ||:::..|:.  .:..||:|::|:||..:.|:.::
  Rat     7 LYYFQGRGRMESIRWLLATAGVEFEEEFLETREQYEKLQKDGCLLFGQVPLVEIDGMLLTQTRAI 71

  Fly   114 ARFLAKTVGLCGATPWEDLQIDIVVDTINDFRLSSEQFVSYEPEDEIKEKKLVTLNAEVIPFYLE 178
            ..:||....|.|....|.::||:..|...|..:.........|::  ||:.|..........|..
  Rat    72 LSYLAAKYNLYGKDLKERVRIDMYADGTQDLMMMIIGAPFKAPQE--KEESLALAVKRAKNRYFP 134

  Fly   179 KLEQTVKDN-DGHLALGKLTWADVYFAGITDYMNYMVKRDLLEPYPALRGVVDAVNALEPIKAWI 242
            ..|:.:||: :..|...:|:|||:...... .|...|...:|..:|.|:.....::.:..||.::
  Rat   135 VFEKILKDHGEAFLVGNQLSWADIQLLEAI-LMVEEVSAPVLSDFPLLQAFKTRISNIPTIKKFL 198

  Fly   243 E 243
            :
  Rat   199 Q 199

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.