back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment GstS1 and Gstm2

DIOPT Version :9

Sequence 1:	NP_001261040.1	Gene:	GstS1 / 36927	FlyBaseID:	FBgn0010226	Length:	250	Species:	Drosophila melanogaster
Sequence 2:	NP_803175.1	Gene:	Gstm2 / 24424	RGDID:	2756	Length:	218	Species:	Rattus norvegicus

Alignment Length:	218	Identity:	60/218 - (27%)
Similarity:	100/218 - (45%)	Gaps:	47/218 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    51 TLFYFNVKALAEPLRYLFAYGNQEYEDVRVT--------RDEWPALKPTMPMG----QMPVLEVD 103
            ||.|::::.||..:|....|.:..|||.:.:        |.:|  |.....:|    .:|.| :|
  Rat     4 TLGYWDIRGLAHAIRLFLEYTDTSYEDKKYSMGDAPDYDRSQW--LSEKFKLGLDFPNLPYL-ID 65

  Fly   104 GK-RVHQSISMARFLAKTVGLCGATPWEDLQIDIVVDTINDFRLSSEQFVSYEPEDEIKEKKLVT 167
            |. ::.||.::.|:|.:...|||.|..|.:::|::.:...|.||.. ..|.|.|:.|.|:
  Rat    66 GSHKITQSNAILRYLGRKHNLCGETEEERIRVDVLENQAMDTRLQL-AMVCYSPDFERKK----- 124

  Fly   168 LNAEVIPFYLEKLEQTVKDNDGHLALGKLTWADVYFAG--ITDYMNYMV-----KRDLLEP---- 221
                  |.|||.|.:.:|.....  |||..|    |||  || |::::|     :..:.||
  Rat   125 ------PEYLEGLPEKMKLYSEF--LGKQPW----FAGNKIT-YVDFLVYDVLDQHRIFEPKCLD 176

  Fly   222 -YPALRGVVDAVNALEPIKAWIE 243
             :|.|:..|.....|:.|..:::
  Rat   177 AFPNLKDFVARFEGLKKISDYMK 199

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.