DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30460 and CG42675

DIOPT Version :10

Sequence 1:NP_611186.2 Gene:CG30460 / 36924 FlyBaseID:FBgn0050460 Length:1868 Species:Drosophila melanogaster
Sequence 2:NP_001262302.1 Gene:CG42675 / 40722 FlyBaseID:FBgn0261561 Length:427 Species:Drosophila melanogaster


Alignment Length:464 Identity:103/464 - (22%)
Similarity:158/464 - (34%) Gaps:139/464 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GENGQLSFGNEKENEH-------ENGNGSGSINVFEQQPLQGSFNSLQFSEAHQLQQQQQQQQQL 101
            ||..|..|.:|...:|       |:......:......|..|  ||...|...:.||:.||:|::
  Fly    13 GELLQYDFESELGQDHILPLKLNESWAARRLMEALSHLPPSG--NSSTNSAPMRFQQRTQQEQEV 75

  Fly   102 Q-------KSQQQQLSTFS------------RVRNTFSMKR------TSSSSKKLGNAKPSESDA 141
            :       ||..:.|:|.:            :||..|..:|      .|:..|.:|......:..
  Fly    76 RRRELMSTKSSAENLATGAPSAATTRLIGNGKVRQMFDERRRGAGIDRSNPLKPIGTLPSPPAQT 140

  Fly   142 ASAAAATVATATATSATLT----NNAPGNQLQRVLIVVNKIDVATNCLTNHLHANPTEIATTNAA 202
            .|.....:.......|.||    .||||.::             |:...|:..|.|.  .|.|..
  Fly   141 KSRPQPPMQRLVKGVADLTMRDAPNAPGRRI-------------TSDSNNNKFATPR--GTLNRN 190

  Fly   203 IKSTTSSTTDP--ETEDSRRGAEDDLPAP--------------------------PPLTSGSSIP 239
            :|...:..|.|  ||...:|.     |||                          ||....:...
  Fly   191 LKPVVTRKTPPAQETTLHQRS-----PAPQRSPKIQATQRVSGGTGAAPTAGRLSPPFVRRAEPK 250

  Fly   240 VP-EYVPEQSTQLTP-----CPCCSRTFAVDTLRKHVVICEK-ASKKRKIFDSSRQRRDGTALST 297
            .| :.|...:|...|     |..|.|.|..|.|.||..:|:: .:.||||||:|:||.:||..:.
  Fly   251 SPVKKVNMDTTTAIPEGTALCRYCGRHFNTDRLAKHEEVCQRMLTTKRKIFDASKQRIEGTEAAA 315

  Fly   298 YVLPKNFGLPNAERTAGLPSPPINSRETTSVNAAPETVNSPLPVR--RKSQTEMVRSTARASLRK 360
            :               .:.|....:|.|.|..|..:.:.:.:...  ||...:.::|...|...|
  Fly   316 F---------------NMKSKGNRNRSTYSSAAQQKGLTTGVKKNNWRKKHEDFIQSIRAAKQVK 365

  Fly   361 AASTLSSNSTPEAPAMAPAASTAPAAPAAPAAPAAPLVRERSLAKRIKAPPCDRCPHCDRTFNPK 425
            |             .:|.....:...|..|:                :.|...:||||.|.||.:
  Fly   366 A-------------HLARGGKLSDLPPPPPS----------------ENPDYVQCPHCGRRFNEQ 401

  Fly   426 AFDRHVEWC 434
            |.:||:..|
  Fly   402 AAERHIPKC 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30460NP_611186.2 zf-C2HC_2 250..274 CDD:464037 9/28 (32%)
zf-C2HC_2 414..435 CDD:464037 11/21 (52%)
CG42675NP_001262302.1 PHA03247 <115..269 CDD:223021 33/173 (19%)
zf-C2HC_2 271..291 CDD:464037 8/19 (42%)
zf-C2HC_2 389..410 CDD:464037 10/20 (50%)

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