DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30460 and zc2hc1a

DIOPT Version :10

Sequence 1:NP_611186.2 Gene:CG30460 / 36924 FlyBaseID:FBgn0050460 Length:1868 Species:Drosophila melanogaster
Sequence 2:NP_001096361.1 Gene:zc2hc1a / 100124952 XenbaseID:XB-GENE-954311 Length:363 Species:Xenopus tropicalis


Alignment Length:494 Identity:116/494 - (23%)
Similarity:173/494 - (35%) Gaps:175/494 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 EQSTQLTPCPCCSRTFAVDTLRKHVVICEK-ASKKRKIFDSSRQRRDGTALSTYVLPKNFGLPNA 309
            |...:|.||..|.|||...||:||:.||:| |.||||.|||||||.:||.:|| |.|        
 Frog     3 EIEEELKPCKICGRTFFTSTLKKHIPICQKSAVKKRKAFDSSRQRAEGTDIST-VKP-------- 58

  Fly   310 ERTAGLPSPPINSRETTSVNAAPETVNSPLPVRRKSQTEMVRSTARASLRKAASTLSSNSTPEAP 374
                              |.|.||........|||.  |...:|.||:  |..|.:........|
 Frog    59 ------------------VKARPEPPKKQSTWRRKH--EEFTATIRAA--KGISQIIKEGGELPP 101

  Fly   375 AMAPAASTAPAAPAAPAAPAAPLVRERSLAKRIKAPPCDRCPHCDRTFNPKAFDRHVEWCKEKAI 439
            ...|:..                            |...:||:|.|.||..|.|||:.:|||:|.
 Frog   102 PPPPSYD----------------------------PDYVQCPYCQRRFNQNAADRHINFCKEQAA 138

  Fly   440 QATMKSTNSQETSKAKERLEARKQYRPPNLKTKRSLARDKYSGNHEEVLEAGEMTTPKPNLMSHS 504
            :...|.....:   .|.:...|.|::|.:||...|.|          .:.:.....|:|.....:
 Frog   139 RMGNKMKGGPD---PKGKPAPRPQHKPLSLKKTNSPA----------AVSSPASRLPQPPNFGKT 190

  Fly   505 MTSSVHSDNTQAQVSSSRGGSRAKANSTVTQNQVNLFNEDPPSSPPPRERSALRRSKRTQRESCI 569
             ||.:.|..:.|  :|...|::.:..|...:|...:      :||                    
 Frog   191 -TSGIPSGKSVA--NSGAPGNKYQTQSPAHKNSTTV------TSP-------------------- 226

  Fly   570 EIDETMEQLRRNGSGDALQLAKLDCVEAPVLQPARRRKRGPKTD-KLDAVEKQICLPQVTMTFDE 633
                              |..|||.: .|.|:..|...|..::| |.|:.     :|:|.     
 Frog   227 ------------------QAGKLDTI-GPPLRTGRDILRMHESDNKTDSY-----IPRVN----- 262

  Fly   634 LNGLIKRKGGTPICNVEMDEQGIGSLVSKHQSSATLVRQARRRIRTKENPDLELRALQSSCSAIS 698
                              |.|.|.....|.::..:|||          ||        ||.::.:
 Frog   263 ------------------DLQPIHKGALKSRTPPSLVR----------NP--------SSGTSFN 291

  Fly   699 KDVQYASLNSSLVPMQRNQSKV-YSGSEEDSPRSEIQIK 736
            |...|...|:      |.::|: |..::...|.::.:|:
 Frog   292 KRKTYNENNA------RPEAKMAYDATDYSKPVNDGRIR 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30460NP_611186.2 zf-C2HC_2 250..274 CDD:464037 12/23 (52%)
zf-C2HC_2 414..435 CDD:464037 10/20 (50%)
zc2hc1aNP_001096361.1 zf-C2HC_2 7..31 CDD:464037 12/23 (52%)

Return to query results.
Submit another query.