DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6967 and AT4G05540

DIOPT Version :9

Sequence 1:NP_611185.3 Gene:CG6967 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_567301.2 Gene:AT4G05540 / 825906 AraportID:AT4G05540 Length:689 Species:Arabidopsis thaliana


Alignment Length:583 Identity:119/583 - (20%)
Similarity:194/583 - (33%) Gaps:219/583 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 ILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSACDTIALKLCE---------------- 320
            :::||||||.|.|:  |.|...|.....:.:|...:|:|...:|.:|..                
plant   134 LIWGPPGTGNTKTV--ATLLFALLSLSCKTVVCTPTNTAVVAVASRLLALFKESSSTEHSTYGLG 196

  Fly   321 ------------------------YIESNI-RLQEHFA--------------------------- 333
                                    :::..| :|.|.|:                           
plant   197 NIVLVGNRVRMGIDERGNDDLLNVFLDDRISKLGELFSPSNEWERSLEAVIDILENAESSYKKYL 261

  Fly   334 ----------------------------QQKLPEPDHQLIRVYSRSIYEKGFASVPSLLLKNSNC 370
                                        .::.||.:.::|..:...:.|| |..:...:.|....
plant   262 LLSERKENQETKNILTAFGEFVMKMFLGSKETPEKEEEIILTFGEFVMEK-FDGLSETMKKIQKD 325

  Fly   371 SKSIYDHIK----ASRIVKYGIIVA---------------------------------TL----- 393
            ...:|.|:.    :|..|| .:|||                                 ||     
plant   326 MVDLYTHLPKSFLSSNDVK-NMIVARQALRQARTFLQEKQGSFTFDCFNKFVCVDCLRTLRLLSK 389

  Fly   394 -------------------------CTVARLVTDTLGRYNFFTHIFIDEAGASTEPE--ALIGIM 431
                                     ||.:.....|..|......:.:|||....|.|  |.:.:.
plant   390 RFEIPALLMKEDIRTFCLQNAHIIFCTASGAAEMTAERAGSIDMLVVDEAAQLKECESVAALQLQ 454

  Fly   432 GIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGNYDRNRQMRLCR 496
            |:.     |.:|.||..||.|:::|.........|||.|||        |..|    :::..|..
plant   455 GLH-----HAVLIGDELQLPAMVQSEVCEKAKFVRSLFERL--------DSLG----HKKHLLNV 502

  Fly   497 NYRSHPQIVRLFNELYYNGELK---------AQAPAMDVNLAANWSVLTNPQFPIIFQATHGVTN 552
            .||.||.|....|..:|.|::.         .|...:..|:..::|.:           ..|:..
plant   503 QYRMHPSISLFPNMEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFI-----------NVGLGK 556

  Fly   553 RE-QNSTSSYNNLEAEVICWYVKRL--INDRVVGQEDVGIVAPYTAQGKLVTKLLQSKGYPNV-- 612
            .| .:..|..|.:|..|:...:..|  ::.....:..||:::||.||...:.:.:..| |.:|  
plant   557 EEFGDGHSPKNMVEIAVVSEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDK-YTSVSD 620

  Fly   613 -----EVGSVETYQGREKTIIIASLVKSFT--NMGFMCNPRRVNVLLSRAKALLILVGNPVTL 668
                 .|.||:.:||.|:.|||.|.|:|..  |:||:.|.:|.||.|:||:..|.::||..||
plant   621 NLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLWVIGNERTL 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6967NP_611185.3 AAA_11 251..456 CDD:289831 55/348 (16%)
AAA_19 256..323 CDD:289986 16/90 (18%)
UvrD_C_2 464..665 CDD:304668 60/221 (27%)
AT4G05540NP_567301.2 AAA_11 108..475 CDD:289831 55/349 (16%)
DEXDc 134..>184 CDD:238005 16/51 (31%)
DNA2 <396..684 CDD:224037 82/317 (26%)
AAA_12 484..679 CDD:289832 59/218 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I1851
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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