DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6967 and helz2a

DIOPT Version :9

Sequence 1:NP_611185.3 Gene:CG6967 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster
Sequence 2:XP_003198895.2 Gene:helz2a / 562461 ZFINID:ZDB-GENE-120920-1 Length:2656 Species:Danio rerio


Alignment Length:547 Identity:140/547 - (25%)
Similarity:233/547 - (42%) Gaps:110/547 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 QLVDNSQI--KVCCDG--HLPNWMQGRPQ-EPATPTSLSLLNSTIYSNAEQLEAVQRIVAGPSTQ 268
            |||.|..:  ::..|.  .:||...||.: ....|:.||.||::      |.:|::..:..|.| 
Zfish  2129 QLVKNIAMGRRITSDRGCKIPNQNTGRFEINSYHPSGLSHLNNS------QSKAIREALTNPFT- 2186

  Fly   269 GPYILFGPPGTGKTTTIVEAI--LQLRLQQPQS------RILVTAGSNSACDTIA---------- 315
               ::.||||||||...|..:  |...:||.|:      .||....||.:.|.:|          
Zfish  2187 ---LIQGPPGTGKTVVGVHILYWLHKNIQQLQASGSKKRAILYCGPSNKSVDVVAGHLLHLRDHL 2248

  Fly   316 ---------LKLCE--YIESNIRLQEHFAQQKLPEPD------HQLIR----VYSRSI--YEKGF 357
                     :::.|  |...|::|..:..:.:.|..:      |.|||    .:|..|  ::...
Zfish  2249 KPLRVYSDQMEMLEFPYPGCNLKLSRNSKRGEKPNTELSSIALHHLIRKEGNPFSTQIRAFDMKV 2313

  Fly   358 ASVPSLLLKNSNCSKSIYDHIKASRIVKYGIIVATLCTVAR--LVTDTLGRYNFFTHIFIDEAGA 420
            .....|..:.....:.|....:...::.:.:|:.| ||.|.  .:.:||.    |..|.|||...
Zfish  2314 QRGDQLTDEERKLFREILKKARKHELLHHDVILCT-CTAASHPALAETLD----FKQIIIDECAM 2373

  Fly   421 STEPEALIGIMGIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGN 485
            :|||||.|.::..|..   .::|.||||||..|:....|..||:||||.||.:::          
Zfish  2374 ATEPEAFIPLVAHKPE---QIVLLGDHKQLQPVVHCEVAERLGMSRSLFERYMEN---------- 2425

  Fly   486 YDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAANWSVLTNPQFPIIFQATHG- 549
                 .:.|...||....|....:..:|.|.|:...||     .:...:....|..|:|....| 
Zfish  2426 -----ALMLDTQYRMQEDICAFPSNEFYGGRLQTGIPA-----KSKLFLTQTKQTCIVFGHVEGK 2480

  Fly   550 ----VTNREQNSTSSYNNLE--AEVICWYVKRLINDRVVGQEDVGIVAPYTAQGKLVTKLLQSKG 608
                |...||.:.:|..|:|  .||:  .|..|:.:..:..:|:.|:.||.||...:::.|.:..
Zfish  2481 EKSLVVRTEQGNENSKANMEEAEEVV--RVAILLTEAGIKTKDIAILTPYNAQVAKISESLHNNH 2543

  Fly   609 YPNVEVGSVETYQGREKTIIIASLVKS---------------FTNMGFMCNPRRVNVLLSRAKAL 658
            ..::.|.::...||.|...:|.|.|:|               ...:||:.:|.:|||.::||:..
Zfish  2544 IRDITVNTIMRSQGSEWRYVIMSTVRSCPKSEIETQPPKSWIMKRLGFITDPHQVNVGITRAQEG 2608

  Fly   659 LILVGNPVTLRHHSDFKFVINECKKHG 685
            |.::||...||..|.::.::|..::.|
Zfish  2609 LCIIGNENLLRCSSLWRKLLNHYQEKG 2635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6967NP_611185.3 AAA_11 251..456 CDD:289831 63/247 (26%)
AAA_19 256..323 CDD:289986 24/95 (25%)
UvrD_C_2 464..665 CDD:304668 54/222 (24%)
helz2aXP_003198895.2 AAA_11 614..807 CDD:289831
P-loop_NTPase 639..>683 CDD:304359
DNA2 <741..1055 CDD:224037
UvrD_C_2 817..1017 CDD:304668
RNB 1338..1698 CDD:214935
AAA_11 2168..2405 CDD:289831 65/254 (26%)
AAA_19 2176..2246 CDD:289986 22/73 (30%)
P-loop_NTPase <2366..2438 CDD:304359 31/89 (35%)
AAA_12 2414..2614 CDD:289832 53/221 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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