DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6967 and armi

DIOPT Version :9

Sequence 1:NP_611185.3 Gene:CG6967 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001014556.1 Gene:armi / 38427 FlyBaseID:FBgn0041164 Length:1188 Species:Drosophila melanogaster


Alignment Length:604 Identity:167/604 - (27%)
Similarity:279/604 - (46%) Gaps:116/604 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 VDKVSSTTVHVRFSRKHKAVLSGQRFYAIIRSRRLTIRYMYRALN----LLQESPLVRRYLFPFP 204
            :.||....:.::|....:...:|:.:.......|.:.|..:.|::    ::.|.       |.||
  Fly   607 IHKVLFDRILLKFHSSFQEKYNGEDYRLEFYFSRYSFRKQHHAISKIVGVMGED-------FLFP 664

  Fly   205 SWLTQLVDNSQIKVCC---DGHLPNWMQGRPQEPATPTSLSLLNSTIYSNAEQLEAVQRIVAGPS 266
            |.:|:. :|.|:.|..   |.:|.:            :.|...|.::  |:.|..||..|:.|.:
  Fly   665 SKVTKR-ENPQLDVYMKDDDMYLYD------------SKLEWYNQSL--NSIQKRAVFNILRGEA 714

  Fly   267 TQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSACDTIALKLCEYIESNIRLQEH 331
            ...||:||||||:|||.|::|.:|||....|.:||||...|||:.|.:..:|   |:|...||..
  Fly   715 ENIPYVLFGPPGSGKTMTLIETLLQLVRNLPGARILVGTPSNSSADLVTKRL---IDSKALLQGD 776

  Fly   332 FAQQKLPEPDHQLIRVYSRSIYEKGFASVPSLLLKNSNCSKSIYDHI------------------ 378
            |            ||:.|.:..||..  :|..::  |.|:.|....:                  
  Fly   777 F------------IRLVSYNQVEKDL--IPPEIM--SYCATSDVGAVGSCEDKMMVTESGLKLRC 825

  Fly   379 KASRIVKYGIIVATLCTVARLVTDTLGRY-------NFFTHIFIDEAGASTEPEALIGIMGIKQT 436
            :|..|..:.|.::| ||       |||.:       ..|||:..||||..||||.::.|:.:.:.
  Fly   826 QAKFIGTHRITIST-CT-------TLGNFLQLGFPAGHFTHVLFDEAGQCTEPETMVPIVMLTKK 882

  Fly   437 ADCHVILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSD-----ENGNYDRNRQMRLCR 496
            .. .|:||||.:||.:::.|..|:.:|.|.|.:||||:...|:.|     |:..|:.....:|..
  Fly   883 RS-QVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYRKDLQRFPESSGYNPLVLTKLLY 946

  Fly   497 NYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAANWSVLTNPQFPIIFQA------THGV----- 550
            |||:.|.|:.:::.|:|:.||   .|.:....:....:|:  :...:|::      .||.     
  Fly   947 NYRALPSIMSIYSRLFYDDEL---IPVLSEKDSRESRLLS--KLRCVFESEKDIPQAHGTFFYGI 1006

  Fly   551 --TNREQN-STSSYNNLEAEVICWYVKRLINDRVVGQEDVGIVAPYTAQGKLVTKLLQSKGYPNV 612
              .||:.| |.|.:|..|...:......|....|.. :.:||:.||..|.|::..:.........
  Fly  1007 IGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTA-DQIGIITPYQKQVKMLRSMFIGTDVVMP 1070

  Fly   613 EVGSVETYQGREKTIIIASLVKSFT---------NMGFMCNPRRVNVLLSRAKALLILVGNPVTL 668
            ::||||.:||:|:.||:.|.|:|..         ::||:...:|:||.:|||:|::|:.|||..|
  Fly  1071 KIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVRCSKRLNVAVSRARAMMIIFGNPHLL 1135

  Fly   669 RHHSDFKFVINECKKHGTY 687
            .....::.:|..|.|:..|
  Fly  1136 AVDECWRQLILFCVKNNAY 1154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6967NP_611185.3 AAA_11 251..456 CDD:289831 74/229 (32%)
AAA_19 256..323 CDD:289986 30/66 (45%)
UvrD_C_2 464..665 CDD:304668 63/228 (28%)
armiNP_001014556.1 AAA_11 698..902 CDD:289831 74/233 (32%)
AAA_19 720..768 CDD:289986 24/50 (48%)
DNA2 <840..1155 CDD:224037 97/329 (29%)
UvrD_C_2 909..1132 CDD:304668 63/228 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438955
Domainoid 1 1.000 151 1.000 Domainoid score I4307
eggNOG 1 0.900 - - E1_COG1112
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4684
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D148890at33208
OrthoFinder 1 1.000 - - FOG0000219
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10887
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9180
SonicParanoid 00.000 Not matched by this tool.
98.830

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