DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6967 and CG2990

DIOPT Version :9

Sequence 1:NP_611185.3 Gene:CG6967 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_727386.1 Gene:CG2990 / 31934 FlyBaseID:FBgn0030170 Length:1100 Species:Drosophila melanogaster


Alignment Length:626 Identity:141/626 - (22%)
Similarity:240/626 - (38%) Gaps:177/626 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 VSSTTVHVRFSRKHKAVLSGQRFYAIIRSRRLTIRYMYRALNLLQESPLVRRYLFPFPSWLTQLV 211
            :|||:        ..||.:|  |...|.:|||.:|.         |..|.:||     |..|.::
  Fly   537 ISSTS--------RLAVAAG--FIVSIEARRLDLRL---------ERDLSQRY-----SEETFII 577

  Fly   212 DNSQIKVCCDGHLPNW-----------------MQGRP--QEPATPTSLSLLNSTIYSNAEQLEA 257
            |....:.....:..|.                 :..:|  |....|..:....:.|..|   |..
  Fly   578 DKHDSQSFATFNFTNLGMLLSEGERFQELRDIIVAKKPPEQHKVLPKIILTKGAPILLN---LNK 639

  Fly   258 VQRIVA--GPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSACDTIALKLCE 320
            ||:..|  ..:|....::.|.||||||.|:|..:..|.|.  ...:|:||.::||.|.:.::|..
  Fly   640 VQQNAALRALTTSSHLLIKGLPGTGKTQTLVALVRLLHLL--GKSVLITAQTHSAVDNLIMRLLP 702

  Fly   321 Y------IESNIRLQ---EHFAQQKLPEPDHQLIRVYSRSIYEKGFASVPSLLLKNSNCSKSIYD 376
            :      :.|..|:.   |..::::|.: |.:.:....:::.:.....|..|     .|...::.
  Fly   703 FGLPMMRLGSGSRIHKQLEEISEERLTK-DCKTVEELEKALGQPSIVGVTCL-----GCGHPLFQ 761

  Fly   377 HIKASRIVKYGIIVATLCTVARLVTDTLGRYNFFTHIFIDEAGASTEPEALIGIMGIKQTADCHV 441
            ..:                              |.:..:|||....:|..|..::...:     .
  Fly   762 RRQ------------------------------FDYCIVDEATQVLQPTVLRPLIHCSK-----F 791

  Fly   442 ILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVR 506
            :|.||.:||..:::|..|...|...:|.:||   |..|:          ...|...||.:..|.|
  Fly   792 VLVGDPEQLPPIVRSKEARQRGADETLFQRL---DSEKA----------TAVLSLQYRMNKTITR 843

  Fly   507 LFNELYYNGELKAQAPAMD--------VNLAANW---SVLTNPQFPIIFQATHGVTNR------- 553
            |.|||.|.|:||..:..:.        :|.|..|   ::.|:.:..:....|.....|       
  Fly   844 LANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTHLEQAVTLINTGDCLERCQEFVYA 908

  Fly   554 -----------EQN---------------STSSYNN-LEAEVICWYVKRLINDRVVGQE--DVGI 589
                       ||:               ..|.|.| .||.::...::.|:..   |.|  .:|:
  Fly   909 SQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYCEAGIVMHLLRYLLKS---GYEASRIGV 970

  Fly   590 VAPYTAQGKLVTKLLQSKGYPNVEVGSVETYQGREKTIIIASLVKS---FTNM------GFMCNP 645
            :|||.||.:|..| |.||...::|..:|:.:|||:|.:||.|..|:   |::|      ..:.:.
  Fly   971 IAPYRAQVELFKK-LASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGDFSDMERSREAEILEDQ 1034

  Fly   646 RRVNVLLSRAKALLILVGNPVTLRHHSD----FKFVINECK 682
            ||:.|.::|||..|||:|:...|..:..    ||.:.:.|:
  Fly  1035 RRLTVAITRAKNKLILLGDIKCLEQYGPFRQLFKHIPDRCR 1075

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6967NP_611185.3 AAA_11 251..456 CDD:289831 43/215 (20%)
AAA_19 256..323 CDD:289986 22/74 (30%)
UvrD_C_2 464..665 CDD:304668 67/256 (26%)
CG2990NP_727386.1 Dna2 99..297 CDD:285859
Cas4_I-A_I-B_I-C_I-D_II-B <283..415 CDD:294426
TIGR00376 480..1069 CDD:273041 139/618 (22%)
P-loop_NTPase 636..859 CDD:304359 64/281 (23%)
AAA_12 815..1055 CDD:289832 67/256 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438974
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10887
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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