DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6967 and Zgrf1

DIOPT Version :9

Sequence 1:NP_611185.3 Gene:CG6967 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster
Sequence 2:XP_006233356.1 Gene:Zgrf1 / 310880 RGDID:1305834 Length:2031 Species:Rattus norvegicus


Alignment Length:856 Identity:186/856 - (21%)
Similarity:328/856 - (38%) Gaps:250/856 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PPSNE-----MIEANTNQDLSAN----NSVF------GDFMKTKRLEFYNVCSV----------- 46
            |..|:     .:|..|.:.||.|    |.:|      |.:::::::..|..|.:           
  Rat  1306 PKGNQCKFFKWLEDVTPEQLSQNESQPNMIFNDIKSIGSYLRSQKIAVYEECQLLLRKGFDFQKK 1370

  Fly    47 ----MQTLLTIDDLSNMELYAQLIQSDVPVQRVSKLTYKITFK---------------------- 85
                ::.|.|:    |.|.|:         :..|||..|::.|                      
  Rat  1371 QHGKLKKLATV----NPEFYS---------ETKSKLYLKLSRKESSSVYSKGDLWVISKTLDFEL 1422

  Fly    86 STPVNAEDFVAP-NLDQVVLVPKASLLASPLPKQLV------------LALLPHPHEDLEPGD-P 136
            .|.:....|..| ::::|.|:|......|..|..:.            |.:|.:..:...|.. |
  Rat  1423 DTFIACSAFFGPSSVNEVELLPLKGYFPSNWPTNITVHALLVCNVSTELTMLQNIQDYFNPATLP 1487

  Fly   137 MLRHVASVDKVSSTTVHVRFSRKHK----AVLSGQRFYAIIRSRRLTIRYMYRALNLLQESPLVR 197
            ::.::.::.:  |.||..:...|.|    |:.|.:..:.::        ::...|.|.:|...|.
  Rat  1488 LMPYLLAMSQ--SATVSSKNVSKRKFIPPAITSIKTKFELL--------HLGATLQLARELINVH 1542

  Fly   198 RYLFPFPSWLTQLVDNSQIKVCCDGHLPNWMQGRPQEPATPTSLSLLNSTIYSNAEQLEAVQRIV 262
            |......|.|.|:   :|:..         .:|..::...|.|.||                   
  Rat  1543 RLNNDQASALMQI---AQMMA---------SRGSDEDALEPFSHSL------------------- 1576

  Fly   263 AGPSTQGPYILFGPPGTGKTTTIVEAILQL--RLQQPQS---------RILVTAGSNSACDTIAL 316
              |.|    ::.|..|.||:..:...||.|  ..::..|         ::|:::.:|.|.|.:.|
  Rat  1577 --PIT----VIHGVFGAGKSYLLAVVILFLVELFEKCDSEAVGRARPWKLLISSSTNVAVDRVLL 1635

  Fly   317 KLCEY-IESNIRL--QEHFAQQKLPEPDH--------QLIRVYSRSIYEKGFASVPSLLLKNSNC 370
            .|... .|..||:  ....|:..||...|        ||..::  ::..:....:..:.::    
  Rat  1636 GLLSLGFEKFIRVGSVRKIAKPVLPYSLHASSDNESEQLKELH--ALMREELTPIERVYVR---- 1694

  Fly   371 SKSIYDH-IKASRIVKYGIIVATLCTVARLVTDTLGRYNF-------FTHIFIDEAGASTEPEAL 427
             |||..| :..:|:         |...||:|..|.....|       |..:.:||....|||.:|
  Rat  1695 -KSIEQHKLGTNRV---------LLKQARVVGITCAACPFPCMNDLKFPVVVLDECSQMTEPASL 1749

  Fly   428 IGIMGIKQTADCH-VILSGDHKQLGAVIKSNRAA-SLGLSRSLMERLLQSDCYKSDENGNYDRNR 490
            :.|...    :|. :||.||.|||...|:.:.|| ..||.::|.:||    |...        ::
  Rat  1750 LPIARF----ECEKLILVGDPKQLPPTIQGSDAAHGNGLEQTLFDRL----CLMG--------HK 1798

  Fly   491 QMRLCRNYRSHPQIVRLFNELYYNGEL------KAQAPAMDVNLAANWSVLTNPQFPIIFQATHG 549
            .::|...||.||.|..:.|:|:|.|.|      :.::|.::      |       .|.:  ..:.
  Rat  1799 PIQLRTQYRCHPVISAIANDLFYEGNLVNGISERERSPVLE------W-------LPTL--CFYN 1848

  Fly   550 VTNREQ--NSTSSYNNLEAEVICWYVKRLINDRVVGQEDVGIVAPYTAQGKLVTKLLQS--KGYP 610
            ||..||  ...|..|..||......::.||...:.|.. :|::..|.:|...:..||.:  ..:|
  Rat  1849 VTGTEQVERENSFVNVAEAAFTLKLIRSLIASGLEGSM-IGVITLYKSQMYKICSLLSAVDVDHP 1912

  Fly   611 N---VEVGSVETYQGREKTIIIASLVKSFTNMGFMCNPRRVNVLLSRAKALLILVGNPVTLRHHS 672
            :   |||.:|:.:||.||.|||.|.|:: ..:||:.:.:|:||.|:|.:..|:::|:...||.:.
  Rat  1913 DVKAVEVSTVDAFQGAEKEIIILSCVRT-RQVGFIDSEKRMNVALTRGRRHLLIIGSLSCLRKNQ 1976

  Fly   673 DFKFVINECKKHGTYLLKKRDSGQRPHILIKADESNEESSSEPEDEDDKLIPSY-----ARMQQH 732
            .:..||..|                     |..|...:.:|:.|.:.|:|:..|     ...|:.
  Rat  1977 LWGRVIQHC---------------------KGREDGLQHASQCEPQLDRLLKEYLEKQAEEKQKK 2020

  Fly   733 TDAAIHKIKAH 743
            |:....|.|:|
  Rat  2021 TEKEKLKDKSH 2031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6967NP_611185.3 AAA_11 251..456 CDD:289831 53/235 (23%)
AAA_19 256..323 CDD:289986 16/78 (21%)
UvrD_C_2 464..665 CDD:304668 58/213 (27%)
Zgrf1XP_006233356.1 DUF2439 3..75 CDD:402138
zf-GRF 1276..1320 CDD:399670 3/13 (23%)
DEAD-like_helicase_N 1543..1807 CDD:421690 72/332 (22%)
AAA_12 1784..1968 CDD:404073 57/212 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335127
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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