DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mov10 and Helz2

DIOPT Version :10

Sequence 1:NP_611185.3 Gene:Mov10 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001292205.1 Gene:Helz2 / 296474 RGDID:1306056 Length:2944 Species:Rattus norvegicus


Alignment Length:523 Identity:137/523 - (26%)
Similarity:220/523 - (42%) Gaps:95/523 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 MQGRPQEPATPTSLSLLNSTIYSNAEQLEAVQRIVAGPSTQ----GPYILF-GPPGTGKTTTIVE 287
            :||.|....|.....::.....||.||:..    .:.||.:    ||.:|: ||  :.|:..::.
  Rat  2466 IQGPPGTGKTVVGFHIVYWFHRSNQEQMPT----GSSPSEEEKLGGPCVLYCGP--SNKSVDVLG 2524

  Fly   288 AILQLRLQQPQSRILVTAGSNSACDTIAL----------KLCEYIESNIRLQE---HFAQQKLPE 339
            .:| || ::.:.|.|...|..:......|          |:.:....|..|:.   |...::.|.
  Rat  2525 GLL-LR-KKTEMRPLRVYGEQAEATEFPLPGVSNRSLFGKISQEGRPNQSLRSITLHHRIRQAPN 2587

  Fly   340 PDHQLIRVYSRSIYEKGFASVPSLLLKNSNCSKSIYDHIKASRIVKYGIIVATLCTVARLVTDTL 404
            |....||.:...:.|....|...||:......|:     :...:.::.:|   |||.:...:.:|
  Rat  2588 PYAAEIRKFDAQLREGKIFSKDDLLVYRRVLGKA-----RKYELERHSVI---LCTCSCAASGSL 2644

  Fly   405 GRYNFFTHIFIDEAGASTEPEALIGIMGIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLM 469
            ...| ...|.|||||.:||||.||.::...:|.  .|:|.||||||..|:|:.:..:||:.|||.
  Rat  2645 KALN-VRQILIDEAGMATEPETLIPLVCFSKTE--KVVLLGDHKQLRPVVKNEQLRNLGMDRSLF 2706

  Fly   470 ERLLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAANWSV 534
            ||              |.|:..| |...||.|..|....:..:|.|:||            .||.
  Rat  2707 ER--------------YHRDAIM-LDTQYRMHKDICSFPSMEFYGGKLK------------TWSD 2744

  Fly   535 LTNP----------QFPIIFQATHG------VTNREQNSTSSYNNLEAEVICWYVKRLINDRVVG 583
            |..|          ..|:||.:..|      |:..|.|..|..|..|...:...:|:|..||.|.
  Rat  2745 LKRPPSLLGHVGKQSCPVIFGSVQGYEQKLLVSTEEGNENSRANPEEVTEVVRIIKQLTLDRTVD 2809

  Fly   584 QEDVGIVAPYTAQGKLVTKLLQSKGYPNVEVGSVETYQGREKTIIIASLVKSFTN---------- 638
            .:||.::.||.||...:::.|..:|...|.|.|:...||.|...:|.|.|::...          
  Rat  2810 PKDVAVLTPYNAQAAAISRGLMQRGVTGVTVTSITKSQGSEWRYVIVSTVRTCPRSDMDQRPTKS 2874

  Fly   639 -----MGFMCNPRRVNVLLSRAKALLILVGNPVTLRHHSDFKFVINECKKHGTYLLKKRDSGQRP 698
                 :||:.:|.:|||.::||:..|.::|:.:.||....:..::..|:...:.:..:|...||.
  Rat  2875 WLKKFLGFVVDPHQVNVAITRAQEGLCIIGDHLLLRCCPLWHRLLGFCEAQNSLVPAERVRVQRK 2939

  Fly   699 HIL 701
            ..|
  Rat  2940 SAL 2942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mov10NP_611185.3 DEXXQc_Helz-like 251..499 CDD:350796 71/265 (27%)
DNA2 <388..684 CDD:440729 97/326 (30%)
Helz2NP_001292205.1 DEAD-like_helicase_N 759..989 CDD:475120
AAA_12 974..1160 CDD:463780
RNB 1565..1923 CDD:214935
DEXXc_HELZ2-C 2446..2721 CDD:350798 76/288 (26%)
AAA_12 2701..2906 CDD:463780 63/231 (27%)
Blue background indicates that the domain is not in the aligned region.

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