DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mov10 and Upf1

DIOPT Version :10

Sequence 1:NP_611185.3 Gene:Mov10 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001116301.1 Gene:Upf1 / 19704 MGIID:107995 Length:1124 Species:Mus musculus


Alignment Length:450 Identity:137/450 - (30%)
Similarity:205/450 - (45%) Gaps:74/450 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 NAEQLEAVQRIVAGPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSACDTIA 315
            |..|:.||:.::..|.:    ::.||||||||.|....:..| .:|....:||.|.||.|.|.:.
Mouse   478 NHSQVYAVKTVLQRPLS----LIQGPPGTGKTVTSATIVYHL-ARQGNGPVLVCAPSNIAVDQLT 537

  Fly   316 LKLCEYIESNIRLQEHFAQQKLPEPD-----HQLIRVYSRSIYEKGFASVPSL----LLKN---- 367
            .|:.:.....:||... :::.:..|.     |..||         ...|:|.|    .||:    
Mouse   538 EKIHQTGLKVVRLCAK-SREAIDSPVSFLALHNQIR---------NMDSMPELQKLQQLKDETGE 592

  Fly   368 -SNCSKSIYDHIK--ASR--IVKYGIIVATLCTVARLVTDTLGRYNFFTHIFIDEAGASTEPEAL 427
             |:..:..|..:|  |.|  ::...:|   .||........|.:.. |..|.|||:..:||||.:
Mouse   593 LSSADEKRYRALKRTAERELLMNADVI---CCTCVGAGDPRLAKMQ-FRSILIDESTQATEPECM 653

  Fly   428 IG-IMGIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGNYDRNRQ 491
            :. ::|.||     :||.|||.|||.|:...:||..|||:||.|||:....            |.
Mouse   654 VPVVLGAKQ-----LILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGI------------RP 701

  Fly   492 MRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMD---VNLAANWSVLTNPQFPIIFQATHGVTNR 553
            :||...||.||.:....:.::|.|.|:....|.|   ......|   ..|..|:.|..|.|....
Mouse   702 IRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQW---PQPDKPMFFYVTQGQEEI 763

  Fly   554 EQNSTSSYNNLEAEVICWYVKRLINDRVVG--QEDVGIVAPYTAQGKLVTKLLQSKG------YP 610
            ..:.||..|..||..:.....:|:.   .|  .:.:||:.||..|...:.:.:|..|      |.
Mouse   764 ASSGTSYLNRTEAANVEKITTKLLK---AGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQ 825

  Fly   611 NVEVGSVETYQGREKTIIIASLVKS--FTNMGFMCNPRRVNVLLSRAKALLILVGNPVTL 668
            .||:.||:.:|||||..||.|.|::  ...:||:.:|||:||.|:||:..:|:||||..|
Mouse   826 EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKAL 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mov10NP_611185.3 DEXXQc_Helz-like 251..499 CDD:350796 78/266 (29%)
DNA2 <388..684 CDD:440729 96/294 (33%)
Upf1NP_001116301.1 Sufficient for interaction with RENT2. /evidence=ECO:0000250 1..410
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..69
UPF1_Zn_bind 116..267 CDD:401391
C3H. /evidence=ECO:0000255|PROSITE-ProRule:PRU01341 118..150
CC/SHH/C. /evidence=ECO:0000255|PROSITE-ProRule:PRU01341 132..160
C4. /evidence=ECO:0000255|PROSITE-ProRule:PRU01341 178..208
TIGR00376 365..906 CDD:273041 136/449 (30%)
DEXXQc_UPF1 476..709 CDD:350797 78/266 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1004..1053
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1066..1091
[ST]-Q motif 1 1084..1085
[ST]-Q motif 2 1102..1103
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1105..1124
Blue background indicates that the domain is not in the aligned region.

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