DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6967 and C41D11.6

DIOPT Version :9

Sequence 1:NP_611185.3 Gene:CG6967 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_491376.1 Gene:C41D11.6 / 183377 WormBaseID:WBGene00016565 Length:852 Species:Caenorhabditis elegans


Alignment Length:801 Identity:141/801 - (17%)
Similarity:236/801 - (29%) Gaps:325/801 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IEANTNQDLSANNSVFGDFMKTKR-----LEFYNVCSVM-------------QTLLTIDDLSNME 60
            :.||...||...|.....:..|.|     .::|...::|             ..:.|.|.:.||:
 Worm   238 VVANDRPDLMYMNFTKWSYDVTSRKYAELKQYYKGDTIMIHKVVKRRDVAPESFMKTFDQIRNMK 302

  Fly    61 L--YAQLIQSDVPVQRVSK-----------------------LTYKITFKSTPVNAEDFVAP--- 97
            .  |.|:.:..:..:::|:                       :|..:|......|  |..||   
 Worm   303 AHNYWQVSEFSLVQRKISEPQPFSLVGRAAGGRHSKKLAVCGVTEIVTVSEDTFN--DNRAPQGY 365

  Fly    98 NLDQVVLVPKASLLASPLPKQLVLALLPHPHEDLEPGDPMLRHVASVDKVSSTTVHVRFSRKHKA 162
            ..|.|...|..      :|.||:.:||        ||.|                |:...|:..|
 Worm   366 RADAVAFTPVL------IPGQLLKSLL--------PGTP----------------HIVVRRETAA 400

  Fly   163 VLSGQRFYAIIRSRRLTIRYMYRALNLLQESPLVRRYLFPFPSWLTQLVDNSQIKVCCDGHLPNW 227
                       :|:...:|     ..::....:..|..:||.                  ||||:
 Worm   401 -----------QSKSWDLR-----PQVINFGIMGARKAYPFL------------------HLPNY 431

  Fly   228 MQGRPQEPATPTS-----------LSLLNSTIYSNAE------------QLEAVQRI---VAGP- 265
            |.||  .|.|..:           ||.:.||...|.:            :||...::   :..| 
 Worm   432 MAGR--SPNTEDAWRGVRKLGHHGLSAMISTSNMNQDKFHYETTLQHVRELEGSMKVSFALQYPG 494

  Fly   266 --------------STQGPYILFGPPGTGKTTTIVEAI--LQLRLQQPQSRI--LVTAGSNSACD 312
                          |.:.|...|.|..........:||  ::.|:.:|....  ::..|.    |
 Worm   495 RPVKACNWKNGTKFSIETPAGTFVPAAVDHAVQSTDAITTIECRILRPADNAVHILAVGE----D 555

  Fly   313 TIALKLCEYIESNIRLQEHFAQQKLPEPDHQLIRVYSRSIYEKGFASVPSL-------------- 363
            .:.:|..:..:.::     .|...:...|..|.|       .||.|:..:|              
 Worm   556 AVLIKQTKEADGHL-----LAATPVVPVDTVLDR-------NKGLATFAALNGGPIIASNGLNYP 608

  Fly   364 ----LLKNSNCSKSIYDHIKASRIVKYGIIVATLCTVARLVTDTLGRYNFFTHIFIDEAGASTEP 424
                ..:|..||......|:|...:|.|.:                                   
 Worm   609 HKEFRYQNFVCSAQQSTFIQACCDLKLGAL----------------------------------- 638

  Fly   425 EALIGIMGIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGN---- 485
             :|.|..|..:|                  |:..|.::..|...::|::.|    ::.||.    
 Worm   639 -SLDGAFGTGKT------------------KAVAATAIEFSNQNIQRVIIS----ANNNGAVKAI 680

  Fly   486 YDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNL--AANWSVLTNPQFPIIFQATH 548
            :|..|.:.    .|...::||                ||...|  .|...|||...|||:::   
 Worm   681 HDAIRSLA----PRGRVKVVR----------------AMSARLRDEAKPEVLTEDDFPILWR--- 722

  Fly   549 GVTNREQNSTSSYNNLEAEVICWYVKRLINDRVVGQEDVGIVAP--YTAQGKLVTKLLQSKGYPN 611
                              ||....|:.:....|.|.....|.|.  ..|.|.|.:.:|.::    
 Worm   723 ------------------EVFTEVVQSVNRPNVRGTHPAIIDAARHLNAHGLLPSPMLNNE---- 765

  Fly   612 VEVGSVETYQG--------------REKTIII---ASLVKSFTNMGFMCNPRRVN-VLLSRAKAL 658
            :.|.....|:.              .|..|||   ||:..:..::||......:. |:|..|..:
 Worm   766 IRVRCKAPYKTEPPAHTIWTALMKIHETAIIIGTTASIHTALNDIGFASKANEIGLVMLDEASQI 830

  Fly   659 -LILVGNPVTLRHHSDFKFVI 678
             :|.:|...|  |....|||:
 Worm   831 PMIKIGGLAT--HFPKAKFVL 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6967NP_611185.3 AAA_11 251..456 CDD:289831 34/256 (13%)
AAA_19 256..323 CDD:289986 13/88 (15%)
UvrD_C_2 464..665 CDD:304668 46/227 (20%)
C41D11.6NP_491376.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156478
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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